FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001132291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2092781
Sequences flagged as poor quality0
Sequence length300
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT177204384.67407722069342No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGC293201.401006603175392No Hit
CTTACCTGAGGAGACGGTGACCGGGGTCCCTTTGCCCCAGACGTCCATGT120070.5737341843222009No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAT116760.557917909231783No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGT107560.5139572654759385No Hit
CTTACCTGAGGAGACGGTGACCACAGGAGACTGTGACAGTGACGGTGACC100270.4791232336302747No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTTGCCCCAGACGTCCATGT61530.2940106967714252No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTCTGCCCCAGACGTCCATGT60470.288945666077817No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC60300.2881333498345025No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGC53430.25530621694290995No Hit
CTTACCTGAGGAGACGGTGACCGTGGCCCCTTTGCCCCAGACGTCCATGT50250.24011112486208544No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCCTGT49570.23686185988882735No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGGCGTCCATGT48550.23198796242894026No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCAATGT46570.22252686735974764No Hit
CTTACCTGAGGAGACGGTGACCACAGACAGGCCACCCAGGGCTCAGGCTG39450.1885051517573984No Hit
CTTACCTGAGGAGACGGTGACCGCGGTCCCTTTGCCCCAGACGTCCATGT38950.18611598633588514No Hit
CTTACCTGAGGAGACGGTGCCCGTGGTCCCTTTGCCCCAGACGTCCATGT36580.17479134223791212No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGCCCATGT31130.14874943914341732No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC30430.1454046075532987No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCGTGT29550.14119967641143533No Hit
CTTACCTGAGGAGACGGTGACCGTGGTTCCTTTGCCCCAGACGTCCATGT29450.14072184332713267No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGTCGTCCATGT27340.13063956524834658No Hit
CTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGTA25200.1204139372442697No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCACGT22750.1087070266788546No Hit
CTTACCTGAGGAGACGATGACCGTGGTCCCTTTGCCCCAGACGTCCATGT22320.10665234441635317No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTTGCCCCAGACGTCCATGT21620.10330751282623457No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATTT21540.10292524635879244No Hit
CTTACCTGAGGAGACGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGTA21280.10168288033960551No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)