FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001132293

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132293
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2276281
Sequences flagged as poor quality0
Sequence length300
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC198601887.24836696348123No Hit
CTTACCTGAGGAGACGGTGACCGGGGTCCCTTGGCCCCAGACGTCCATAC137510.6040994060047946No Hit
CTTACCTGAGGAGACGGTGACCACAGGAGACTGTGACAGTGACGGTGACC126600.5561703497942477No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC123430.5422441253957662No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGC62320.2737799067865523No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCATAC60350.26512543925815835No Hit
CTTACCTGAGGAGACGGTGACCGTGGCCCCTTGGCCCCAGACGTCCATAC58070.25510910120499186No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCCTAC53420.23468104333340215No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCAATAC51540.22642195757026484No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGGCGTCCATAC47980.2107824121890048No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGACGTCCATAC45440.19962386014731925No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTCGGCCCCAGACGTCCATAC40780.17915187096847884No Hit
CTTACCTGAGGAGACGGTGACCACAGACAGGCCACCCAGGGCTCGGGCTG39600.17396797671289266No Hit
CTTACCTGAGGAGACGGTGCCCGTGGTCCCTTGGCCCCAGACGTCCATAC39490.1734847323331346No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAT39440.17326507579688097No Hit
CTTACCTGAGGAGACGGTGACCGCGGTCCCTTGGCCCCAGACGTCCATAC39150.17199106788660978No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCGTAC34090.14976182641774016No Hit
CTTACCTGAGGAGACGGTGACCGTGGTTCCTTGGCCCCAGACGTCCATAC32950.1447536573911569No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATCC32180.14137094673285064No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGCCCATAC30270.13298006704796111No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCGGACGTCCATAC28060.1232712481455497No Hit
CTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATACC25700.11290345963437731No Hit
CTTACCTGAGGAGACGATGACCGTGGTCCCTTGGCCCCAGACGTCCATAC25680.11281559701987584No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)