FastQCFastQC Report
Fri 2 Sep 2022
EGAF00001132326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116269
Sequences flagged as poor quality0
Sequence length300
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGT9183378.9832199468474No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGCTGGAAGT21321.833678796583784No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGC11150.9589830479319508No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT9820.8445931417660769No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTCGAAGT6420.5521678177330157No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT4630.3982144853744334No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGAGCTGGAAGT4400.37843277227807925No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGCTCGAAGT4310.37069210193602764No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT3800.3268283033310685No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGCAGT3480.2993059198926627No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGGTGGAAGT3150.2709234619718068No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGGGCTGGAAGT3010.2588824192175042No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTTGCCCCAGTGCTGGAAGT2650.22791973784929775No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGA2620.22533951440194722No Hit
CTTACCTGAGGAGACGGTGCCCAGGGTGCCCTGGCCCCAGTGCTGGAAGT2430.20899809923539378No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGAAAGT2230.19179660958639017No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGG2190.18835631165658945No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTACTGGAAGT1890.16255407718308407No Hit
CTTACCTGAGGAGACGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGTA1700.14621266201653063No Hit
CTTACCTGAGGAGACGGTGACCGGGGTGCCCTGGCCCCAGTGCTGGAAGT1640.14105221512182956No Hit
CTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGTA1610.13847199167447902No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGCTGAAAGT1590.13675184270957866No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTACTGGAAGT1570.13503169374467827No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGCTGGAAGC1570.13503169374467827No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGGTCGAAGT1500.12901117236752704No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGCTGGAAGT1450.12471079995527612No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCCGGCCCCAGTGCTGGAAGT1380.11869027857812488No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCGAAGT1330.11438990616587397No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGCAAGT1240.10664923582382234No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)