FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132330

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132330
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64433
Sequences flagged as poor quality0
Sequence length300
%GC55

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT1108917.21012524637996No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC786812.211134046218552No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT54568.467710645166298No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC51928.057982710722767No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG46757.255598839104185No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTACCAATCCC37895.88052705911567No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGACCA25864.013471357844582No Hit
CTTACCTGAGGAGACGGTGACCAGGGTCCCCTGGCCCCAGTAGTCAAAGG18152.816879549299272No Hit
CTTACCTGAGGAGACGGTGACCAGGATTCCCTGGCCCCAGTAGTCAAGAC9391.4573277668275573No Hit
CTTACCTGAGGAGACGGTGACCACAGGAGACTGTGACAGTGACGGTGACC7131.1065758229478684No Hit
CTTACCTGAGGAGACGGTGACCCACACCAAGCTCAGAGAGGGCAGGGGTG3540.549407912094734No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCACAGTACCAATCCC3460.5369919140812938No Hit
CTTACCTGAGGAGACGGTGACCTGTCCACTACTGACTTAGCTGTGTACCC3310.5137119178060932No Hit
CTTACCTGAGGAGACGGTGACCACCAGACCACAGGCTCAGAAACGAGGTT3070.4764639237657722No Hit
CTTACCTGAGGAGACGGTGACCGTTGTCCAGGGGCCTGTCGCACCCAGAG2120.3290239473561684No Hit
CTTACCTGAGGAGACGGTGACCACAGACAGGCCACCCAGGGCTCGGGCTG1800.27935995530240715No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCACGGCCCCAGAGATCGAAGT1800.27935995530240715No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCATGGCCCCAGAGATCGAAGT1440.2234879642419257No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCCGGCCCCAGAGATCGAAGT1430.22193596449024566No Hit
CTTACCTGAGGAGACGGTGACCCAGGAAGGGGCTCTGGTGCCGGGCTGAG1420.22038396473856564No Hit
CTTACCTGAGGAGACGGTGACCGTGGTTGTCCAGGGGCCTGTCGCACCCA1410.2188319649868856No Hit
CTTACCTGAGGAGACGGTGACCAAATAGTTAATACGAAACTTGTCCAGGG1320.20486396722176523No Hit
CTTACCTGAGGAGACGGTGACCACAGACAGGCCACCCAGGGCTCAGGCTG1100.17071997268480438No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGGTCGAAGT1070.16606397342976426No Hit
CTTACCTGAGGAGACGGTGACCAACTTTAAAGGTAAGGATCCCATTGTCC1030.1598559744230441No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGCTGGACCA1020.15830397467136406No Hit
CTTACCTGAGGAGACGGTGACCACACGCAGTGTGATATCCTGGGACAGAA980.1520959756646439No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGTCCAGGGGCCTGTCGCA870.13502397839616345No Hit
CTTACCTGAGGAGACGGTGACCAGGCTAGGGCCCTTGGTACGGGCTGAGG860.13347197864448343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG830.12881597938944328No Hit
CTTACCTGAGGAGACGGTGACCAAGGCCCCAAGGTGATATCCGTGTCCTG820.12726397963776326No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGTCCAGGGGCCTGTCGC780.12105598063104309No Hit
CTTACCTGAGGAGACGGTGACCCTGTGGGCTAAGGTCTCCCTTTGGCCAG760.11795198112768301No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCATAC760.11795198112768301No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC730.1132959818726429No Hit
CTTACCTGAGGAGACGGTGACCCAAATCCAGAGTCTGTAGCCCCACCCCA710.11019198236928282No Hit
CTTACCTGAGGAGACGGTGACCCTGCCTAGGATGTCCTATCTTAAGGTGA710.11019198236928282No Hit
CTTACCTGAGGAGACGGTGACCCCATCCACTTCTCAGGGAACAGGGCATT710.11019198236928282No Hit
CTTACCTGAGGAGACGGTGACCGTGGCCCACCAAGGGTGTCTGCCAGCTG700.10863998261760278No Hit
CTTACCTGAGGAGACGGTGACCCGGCCAGGGCTGGGGGCTGGGGGTGAGT690.10708798286592275No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGC680.10553598311424271No Hit
CTTACCTGAGGAGACGGTGACCCCATCATAGCCCTGCTGACCCTGTGACC680.10553598311424271No Hit
CTTACCTGAGGAGACGGTGACCTCTCTCCAGGCTCTAAGGGAGAGCGGGT680.10553598311424271No Hit
CTTACCTGAGGAGACGGTGACCAAGGTGGTGGCGGTGGACGGCGACTCGG660.10243198361088261No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCCTGGCCCCAGATATCAAAAG660.10243198361088261No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTACCCATCCC660.10243198361088261No Hit
CTTACCTGAGGAGACGGTGACCGGGCTTATTAACGAATTGTCCAGGGGCC650.10087998385920258No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)