FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132346

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132346
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1026
Sequences flagged as poor quality0
Sequence length99-300
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC38937.914230019493175No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC686.627680311890838No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT676.530214424951267No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG626.042884990253411No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT403.898635477582846No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT141.364522417153996No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC111.0721247563352825No Hit
CTTACCTGAGGAGACGGTGACCACAGGAGACTGTGACAGTGACGGTGACC90.8771929824561403No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACC60.5847953216374269No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCGAACC60.5847953216374269No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCTTGGCCCCAGTAGTCAAAGG50.4873294346978557No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGT50.4873294346978557No Hit
CTTACCTGAGGAGACGGTGACCCAGGAAGGGGCTCTGGTGCCGGGCTGAG40.3898635477582846No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGG40.3898635477582846No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGC40.3898635477582846No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAA40.3898635477582846No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATGGG40.3898635477582846No Hit
CTTACCTGAGGAGACGGTGACCACAGACAGGCCACCCAGGGCTCGGGCTG40.3898635477582846No Hit
TTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC40.3898635477582846No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCACCCAGTTATAA40.3898635477582846No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGGGAG30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACATCCATGT30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGCGTCGAACC30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCATGGCCCCAGGGGTCGAACC30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACCT30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACTA30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCCACG30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCTCCAG30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCGTAGTCCCTTGGCCCCAGACGTCCATAA30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAAGGCGACTAAA30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAG30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTTGACTATAA30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCACCGAACCATAG30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGACT30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGGAC30.29239766081871343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATAG20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCTGGGGACAGGGACAGGTGGTCCTGGGAT20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAAGC20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATGAT20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCTCAGACGTCCATGT20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCCGGCAGCAGCACATGGCACCCGCGCAGA20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTTGCCCCAGGGGTCGAACT20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCGGGCCCCAGTAGTCAAAGC20.1949317738791423No Hit
CTTACCTGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTAA20.1949317738791423No Hit
CTTACCTGAGGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCAAAACCC20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTGTGCCCCAGACGTCCATGT20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACT20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGATAG20.1949317738791423No Hit
CTTACCTGAGGAGATGGTGACCAGGGTTCCCTGGCCCCACGCTAGAGTAG20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGA20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCGAAAT20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACAAA20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAA20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGACGTCCAACC20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCAAACC20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGCGTTGGTATT20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGCCCAAGCTAT20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAAGC20.1949317738791423No Hit
CTTATCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCAAAT20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCCGGCAGCGGCACATGGCACCCGCGCAGA20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCGTGTTCCCTTGGCCCCAGACGTCCATAC20.1949317738791423No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGATAGTCGGGCTCTACCA20.1949317738791423No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)