FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001132353

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132353
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4138233
Sequences flagged as poor quality0
Sequence length300
%GC57

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAC282232968.20130717627548No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGACCAG82066119.83119365197658No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGACCCG164860.3983825946968187No Hit
AGGGTTCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGACCAG108050.26110177943097934No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGCGATAGCAGCTGGTACTAC91620.22139884341940147No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGACCAC64810.1566127378521219No Hit
AGGGTGCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAC60490.1461734996555293No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGCCCAG55490.13409104803910268No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTCCTAC48190.11645066867911982No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTCC47430.11461413603342295No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)