FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001132355

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132355
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1386542
Sequences flagged as poor quality0
Sequence length300
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGGAGACTGTGACAGTGACGGTGACCACAGACAGGCCACCCAGGGCTC154831.1166628922888742No Hit
ACAGACAGGCCACCCAGGGCTCGGGCTGGGTATGGTGGGCTCTGGTGGGA44810.32317809341512915No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATATCG31530.22740025184956533No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGCAGCTACC25310.18254044955003165No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAGTCACC24630.17763616248191544No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATAACC23690.17085670682893125No Hit
CCATCATAGCCCTGCTGACCCTGTGACCTTGTGGCAGCCCCTCTGGCCCC20220.14583041840780878No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAATTGCACGATCGAATAATCACTACC18860.13602184427157635No Hit
GTGGTCCCTTGGCCCCAGACGTCCAAGCGAAAATTCGCACAGTAATATAC18650.1345072850299522No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTCTAAGCAGCTGGTACTACT17740.12794419498291434No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCTTCTGAATCTCTCGCACA17510.12628539200399266No Hit
CACACCAAGCTCAGAGAGGGCAGGGGTGGGAAGGAGACATCAGATGTGGG17350.1251314421056124No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTGTGGTAG17230.12426597968182716No Hit
AGGGTTCCCTGGCCCCAGTAGTCCCAAGCCCCGTACCAGCTGCTGCTATC16880.12174171427912028No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTCCCATAGGTA16830.12138110493587645No Hit
ATGTTTCCCTGGCCCCAGGGGTCGAACCAGTTGTACGCCGAGCTGCTATA16770.12094837372398383No Hit
AGGGCTCCCTGGCCCCAGTAGTCGTAGCTCCCACTCGCCGCACAGTAATA16520.11914532700776463No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGAAGGAGTCACCGTAACT16510.11907320513911589No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAACTATAGCA16160.11654893973640901No Hit
GTGGTCCCTTTGCCCCAGACGTCCATACCGTAGTACCAGCCACTGCTATA16090.11604408665586761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGCCGTAGTCACCGTAGTCCCC16050.11575559918127255No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTATGGGTA15890.11460164928289225No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCGTCCCTTTGGTAACCACTACT15880.11452952741424348No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCTTCCGCCGGGTAGGTCTCTCGC15840.11424103993964842No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTACTAGGTTTC15810.11402467433370211No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTTCGACGG15780.1138083087277558No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGGACACTTTCAACCC15670.11301496817261937No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTACCCCAAGTA15600.11251011509207799No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAACTGTA15570.11229374948613169No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAATTTTTCCCAGTCGACAAATCTCT15550.11214950574883414No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTCCTCAAAATACCCTGAGGGGGC15500.11178889640559031No Hit
AGGGATCCCTGGCCCCAGGGGTCGGACCTCTTAGGCTAATAATCACTACT15470.111572530799644No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGGATACGTAGCCACC15390.11099555585045386No Hit
GTGGTCCCTTGGCCCCAGACGTCCATTTGGTTGGTGCCAGCCACTGCTAC15380.1109234339818051No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGCTGAAAACCAT15380.1109234339818051No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCATTGGAGACCAGCCACCT15360.11077919024450755No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAACCCCCCGAACC15360.11077919024450755No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGATCAGAGT15340.11063494650721001No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTCTATAACCAT15330.11056282463856126No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGCCGTTAAC15310.11041858090126372No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACTCATAGAAGCTTTGGTCCGTGC15270.11013009342666866No Hit
GTGGTCTCTTGGCCCCAGACGTCCATACCGTAGTAGTAGCCCCCATCTCT15240.10991372782072234No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGTGCCGATA15210.10969736221477604No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTACCCTTTGGTCCGACTATA15180.10948099660882975No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCAGAGTACCGTGAGGAATA15170.10940887474018098No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGGGTCAGCTGCT15160.1093367528715322No Hit
GTGGTCCCTTGGCCCCAGACGTCCATTCCGTAGTAGCCCATTACCATAGG15140.10919250913423466No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCCCATCCCCGAATAGCTCCCAC15100.10890402165963958No Hit
AGGGTTCCCTGGCCCCAGTAGTCAACGGGACCCCCGCGGACTAACTCCCC15020.10832704671044945No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTGAGGGTA15010.10825492484180067No Hit
ATTGTCCCTTGGCCCCAGATAGCGCAATCACCACCACAATCAGGACTCGC14990.10811068110450313No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTTCTCTCCTTGTGGGTAGC14960.10789431549855684No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATTAAG14950.10782219362990807No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTATCCGCCGGGGGGCCACTC14930.10767794989261055No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTTCCAGCTGCTGCTGCC14910.107533706155313No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGCTTGGGTG14770.10652399999423025No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCACCACTCCCGACTCCGGAGGT14750.1063797562569327No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATGATC14730.10623551251963519No Hit
GTGGTCCCTTTGCCCCAGACGTCCATTAAAGCGGACCTGGGAACCACCAC14730.10623551251963519No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTACCCCAC14680.10587490317639134No Hit
AGGGTGCCACGGCCCCAGAGATCGAAGTACCAGTGTCCATTACGGGGGCC14660.1057306594390938No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAAAGAGTAGCTCC14430.10407185646017214No Hit
AGGGTTCCCTGGCCCCAGTGATGCAAATCTTTCGCACAGTAATATACGGC14420.10399973459152337No Hit
GTGGTCCCTTGGCCCCAGACGTCCATAGAGACTGATCCCCATGCGGCGCC14280.10299002843044062No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTCTCTTCCCCG14260.10284578469314308No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATTGTG14260.10284578469314308No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGTCACCACT14250.10277366282449432No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGAGGAATACACGACCATGTCTTCA14240.10270154095584555No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACGCGTAGCTCCCACTATA14210.10248517534989923No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAAAAATTATCGGGTAGTCGGTC14210.10248517534989923No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGAGTCCAGAGAAGTATAT14210.10248517534989923No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTTAATAAC14200.10241305348125049No Hit
AGGGTTCCCTGGCCCCAGGGCTCATAACCACTACTATCATAGATTCTCGC14160.1021245660066554No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGACCCCCTG14130.10190820040070911No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAATCCCCGTCGTTCCAGTTGCCATAA14120.10183607853206034No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGCAAGGGTAGTA14110.10176395666341156No Hit
AGGGTTCCCTGGCCCCAGTATCTCAGCCCCCGTCGATCTCTCGCACAGTA14110.10176395666341156No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGGGAGTAGCA14090.10161971292611403No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCTAGACTACTATCATAGTAATA14090.10161971292611403No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGGTCACCGTTAAATCGTTCTCTCGC14080.10154759105746526No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGGGTTGTAAC14070.10147546918881649No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTACCTTCC14060.10140334732016772No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGTTTTCCCC14040.1012591035828702No Hit
GTGGTCCCTTGGCCCCAGACGTCCCCAAGACCCTCGTAGTAACGCTCTTT13980.10082637237097758No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTGGTCAACATCGTAATAACCACT13960.10068212863368003No Hit
AGGGTTCCCTGGCCCCAGGTACTATAGCTCCCACTATACTCTCTCGCACA13940.10053788489638252No Hit
AGGGTTCCCTGGCCCCAGGAGTCAAAGTAACCAGCGTATATAGTGGTACA13920.10039364115908497No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTCTCGGTCACCGTCCGGATCTCT13900.10024939742178744No Hit
GTTTTCCCCTGGCCCCAGACGTCCATACCATAGTAATACAAGTGAGACGT13900.10024939742178744No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGGCCAGCACGCCATCCAGCTGCTGC13890.10017727555313867No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)