FastQCFastQC Report
Wed 31 Aug 2022
EGAF00001132359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67
Sequences flagged as poor quality0
Sequence length167
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGTTCCCTGGCCCCAAATCAGTCCTGTCGTACAATAATAGACGGCTGT3958.2089552238806No Hit
AGGGTTCCCTGGCCCCAAATCAGTCTTGTCGTACAATAATAGACGGCTGT34.477611940298507No Hit
GTGGTCCCTTGGCCCCAGACGTCCACACCGTAGTTGCTCCCACTATACCC22.9850746268656714No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAAGAGAGGTGGGAGTA22.9850746268656714No Hit
CAGGAAGGGGCTCTGGTGCCGGGCTGAGCGGGGGAAGCAGGGGTAACGGA22.9850746268656714No Hit
AGGGTTCCCTGGCCCCAAATCAGTCCTGTCGTACAATAATAGACGACTGT22.9850746268656714No Hit
AGGGTTCCCTGGCCCCAGTTCCACTCCAAAAATCGCCCTTTCGCACAGTA22.9850746268656714No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTCACCGTA22.9850746268656714No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGGCCCGCAGGTACCAGCT22.9850746268656714No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAATACCCCCCTCTCTCTCGCAC11.4925373134328357No Hit
AGGGTTCCCTGGCCCCAAATCAGTCCTGTCGTCCAATAATAGACGGCTGT11.4925373134328357No Hit
AGGGTTCCCTGGCCCCAGATCAGTCCTGTCGTACAATAATAGACGGCTGT11.4925373134328357No Hit
AGGGTTCCCTGGCCCCACCCGGCCACTGCTATACCTACAACTTTCGCACA11.4925373134328357No Hit
AGGGTTCCCTGGCCCCAAATCAGTCCTGTCGTACACTAATAGCCGGTTGT11.4925373134328357No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTTACCAGCCACTGACTCCTCTCT11.4925373134328357No Hit
AGGGTTCCCTGGCCCCAAATCAGTCCTGTCGTACAATAGTAGACGGCTGT11.4925373134328357No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGCAGCAG11.4925373134328357No Hit
AGGGTTCCCTGGCCCCAGTAGTCAACCGCGCCATAGCTGTATCCCGCTAC11.4925373134328357No Hit
AGGGTTCCCTGGCCCCAAATCAGTCTTTTCGTACAATAATCGACGTCTGT11.4925373134328357No Hit
TCTGTCTCCTCTCTGTCTCCTCTCTGTCTCATATCTGTCTCCTCTCTGTC11.4925373134328357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)