FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132367

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132367
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Sequences flagged as poor quality0
Sequence length208
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAC23.7735849056603774No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTG23.7735849056603774No Hit
ATTGTAGAAAGAGTTTGGGAGACGAATTGGTAAAAAATTTTTATTTTTTT11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGTGAAGGCAGCTGTTCCATC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCCCGTAGCAGCTTAAACCACTAC11.8867924528301887No Hit
ATTGCCATTGTCCCTTGGCCCCAGATATCAAAAGCATCAGTTCCAGATGT11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTACGGTGGCCGGTACTCCT11.8867924528301887No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCGAGGGT11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGAAGGTAGCACGACCAAC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACTAGGAGACACCCCCAGGATCTTC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGTGTTAGCAACCCCTTCTTC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGCTGGAAGTATTCATTGTTCATCGGCACCAT11.8867924528301887No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTCGTAGTAGTAGGCGTCCGC11.8867924528301887No Hit
ATTGTAGAAAGAGTTTGGGATATAAAACGTGTTTTGTACGTAAGTGATTT11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTAGCAAGTGGAACTACCACA11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGCAGTACTCGCGACTGAGACACTC11.8867924528301887No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTATGTATAATA11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGCTGTCAGTAGTTACCGCTAT11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGGCGCGCGCCCTTC11.8867924528301887No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCCTAATATGTATCTTCGCTATA11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACGGGTAGTCACCGTAGTC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAGGCAGGAGACAGCTGCTGGCACGAC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTATCTAGCGCTGGTTATCAC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGGTAGCAGCCGTTACGAC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGCGCTGGAATATGATACACC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAATCCTTTGTCACGTGGAACAA11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCGAGAAACCGCAGCTGGTCCCAC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTATCAGCCACTGCTCTCTGA11.8867924528301887No Hit
GTTAAAATTTTGGGTTAAGGAGATTGATGCGTTGTTGTTTGTATTAAGAG11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGAGGTCAAAACAGTAGCTGTAGGATGGAACTAC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGTGTTTTCTGCTCGAACTAT11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGTAGTCCCAATAGCCCAGGGTGCCGATACTAGA11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGTGGTCGAAGCATCACATAGCAGCTGGTACCAG11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAATGGTGACTAC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACTAGTAGCTAGCGACTTATTATCC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTAGTTTTTCGGCGACGGGTG11.8867924528301887No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGCCGTAGTAGTAATAGTAAGGTAT11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCAGATCGCTGCTGGTTCTAT11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCAAAACCGGAGATAGCACCTGTATTTCC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGCACTAC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACATCATACTACCTCTCCG11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATTGCAGCAGGTGCTAC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAAGCAGGAGATATAAGCTGGGAATAC11.8867924528301887No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGAATTCATTTTTCGGCGGGCTCAT11.8867924528301887No Hit
AACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTAC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGGCGAACCAGGAGATAGCAGTAGGAAAGAA11.8867924528301887No Hit
AGGTTTCCCTGGCCCCAGTGGTCATACTTGGAGAAATCAGCTCTAACTAC11.8867924528301887No Hit
GGTTTTTGGGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTG11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTCACAGTGTGGGAGGCCCCA11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAATTGTAGTACCGCTCCGGGAC11.8867924528301887No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATCGCAGCTGGCACGAC11.8867924528301887No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)