FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences185
Sequences flagged as poor quality0
Sequence length208
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCGCCTGCACTAAGAGAAACGCAACGAACAACTTTGTCAATGCATTGC6032.432432432432435No Hit
CGATGTATCCAAGTCTGACGGCCCCAGAAACGGGTGTGCAGGGCGCCCAT5127.56756756756757No Hit
CGGGTCACCTTCTGAATTTTTACCTTCATAAACAGCAAGGACTGCGCTCT189.72972972972973No Hit
GCCCTGTAATCCCAGCTCCCCGGGAGGCTGAGGTCGGCGGATCGTGGGTG84.324324324324325No Hit
CGGGTCACCTTCTGCATTTTTACCTTCATAAACAGCAAGGACTGCGCTCT21.0810810810810811No Hit
GCCCTGTAATCCCAGCTCCCCGGGAGGCTGAGGTCGGCGGATCGTGGGCG21.0810810810810811No Hit
GGGGTTCCCCGGCTCCAGAAGCCCAGGCCTCGCTGATAAGTCCCCGAATC10.5405405405405406No Hit
TGTCGCCTGCACTAAGAGAAACGCAACGAACAACTTTGTCAATACATTGC10.5405405405405406No Hit
TGTCACCTTCTGAATTTTTACCTTCATAAACAGCAAGGACTGCGGATCGG10.5405405405405406No Hit
GTGGTCCCTTGGCCCCAGACGTCCAGACCGTAGTTAACCCATCGTCTAGC10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCGGACGGAAGCTGCTGCTATACC10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAATCGGGAGGGCTGGTAGTTCCACCT10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGTACTCCATCCCTGAACCATAGTAACTCGATCT10.5405405405405406No Hit
GTTAAAATTTTGGGTTATTTTTTGAATTTTTATTTAGATCGGAAGAGCGG10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACGAGTTACCAGCTGGCACTAC10.5405405405405406No Hit
CGGGTCACCTTCTGACTTTTTACCTTCATAAACAGCAAGGACTGCGCTCT10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACGACGTCGTTCCAGTTCTAATGGG10.5405405405405406No Hit
TGTCGCCTGCACTAAGAGATGGAGAAAGAGAATCTAGGCTCAAAATCTAC10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACCGCAGGAGCCTGAGGTAATAACC10.5405405405405406No Hit
GCCCTGTAATCCCAGCTACTCTGGACACGGAGCAGGTCAAACTGATCGGA10.5405405405405406No Hit
TGTCGCCTGCACTACGAGAAACGCAACGAACAACTTTGTCAATGCATTGC10.5405405405405406No Hit
GCCCTGTAATCCCAGCTACTCGGGAGGCTGGGGCAGGAGAATCGCTTGAA10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACCTCCAACCACTCCAAAA10.5405405405405406No Hit
GTCGCCTGCACTAAGAGAAACGCAACGAACAACTTTGTCAATGCATTGCA10.5405405405405406No Hit
GGTTTTTGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTGTG10.5405405405405406No Hit
CGTATCCAAGTCTGACGGCCCCAGAACCGGGTGTGCAGGGCGCCCATTGG10.5405405405405406No Hit
CGGGTCACCTTCTGAATTTTTACCTTCATAACCAGCAAGGACTGCGCTCT10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGCTCTCTCTCAGAACAACTCTATTCCACCTAAT10.5405405405405406No Hit
TGTCGCGTGCACTAAGAGAAACGCAACGAACAACTTTGTCAATGCATTGC10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCGGAGGATGGTACACCCGCA10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTTGCTGTAAGCAACTCT10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAATGAGTAATACCAGCTGCTGCTGTA10.5405405405405406No Hit
TGTCGCCTGCACTAAGAGAAACGCAACGAACAACTTCGTCAATGCATTGC10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCAAGGGTTGCTATACCTTT10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACCGATCGTAGCCACTATA10.5405405405405406No Hit
TGTCGCCTGCACTAAGATAAACGCAACGAACAACTTTGTCAATGCATTGC10.5405405405405406No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGCCGTAGTAGTAGTACCCCTTGCT10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGTGGTCAAAAATGGGACGCTTATAACCAGTCAA10.5405405405405406No Hit
CGATGTATCCAAGTCTGACGGCCCCAGAAACGGGTGTGCAAGGCGCCCAT10.5405405405405406No Hit
GCCCTGTAATCCCAGCTGCTTGGGAGGCTGAGGCAGAGAGAATTGCTTGA10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGCCGCCGATGGGACCACCACC10.5405405405405406No Hit
TGTCGCCTGCACTAAGAGAAACGCAACGAACAACTTTGTCGATGCATTGC10.5405405405405406No Hit
CGGGTCACCTTCTGAATTTTTACCTTCATAAACAGCAAGGACTGCGGATC10.5405405405405406No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGGTCCCGTAAAG10.5405405405405406No Hit
GCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTAAA10.5405405405405406No Hit
TGTTGCCTGCACTAAGAGAAACGCAACGAACAACTTTGTCAATGCATTGC10.5405405405405406No Hit
CGATGTATCCAAGTCTGGCGGCATGGGGGTCAGGGACGCACTTGAGGAGG10.5405405405405406No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGCCCCCGTTTGTTCCAGTTACCCG10.5405405405405406No Hit
AGGGTTCCCTGGCCCCAGTAGTCCTTTCCCCTCTCCCCGTACCATAGTTT10.5405405405405406No Hit
GCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAGTCGCTTGAA10.5405405405405406No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)