FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132378

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132378
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37
Sequences flagged as poor quality0
Sequence length208
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGTTCCCTGGCCCCAGTAGTCAAAGCGAGGCCCCATACCTTAATAGAT12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACCCCATAGCAGCGCTCCA12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGAAGTCAAAGTAATAACTCACAGCAGCACACTC12.7027027027027026No Hit
GTGGTGCCTGGGCCCCAGACGTCCATACGGTAGGAGATGGCACGAAATAC12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGACCATAGGGTAAGGGACGTC12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGGACAAGGCCGC12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTATTGGGGAGT12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTCCACCCCCGGGAGCGG12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGAAGCTGTAGTAGCACCC12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTATGAACTTCGAACAAGAT12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGAGGCAGTAGTAATGGGC12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTTCCGGTACCATACTCTCGC12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGAAAGCAGCGGGTTCTATAAC12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAACCGATACT12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGCCCCGACAACAGCTATTATA12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAAAACTCCCCGAACCATAGTAATAA12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAATAGTCCGACCACCCCAGAGCGTCCCACGATCG12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAAAGTGTCCTACCACTATCATAGGT12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTAGTAGTCATAACTACCTTG12.7027027027027026No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCACCACCACGTCTGCTACACCC12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTACA12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTCGTGGCATTC12.7027027027027026No Hit
ATAAGGCCACGTATTTTGCAAGCTATTTAACTGGCGGCGATTGCGTACCC12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGCAGGGATGCCC12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGAAGCTCCAGCTATGGTATGTCCCCC12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGCCCATTACAACATCTCTCACACA12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATAGTA12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGCAGTCGTCGCACGACTC12.7027027027027026No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTCGTAGTAGTAGTAGTGTTGTAA12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAAGAAATGTAATAACCACTACCACC12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGACGAGCTTTCTTCT12.7027027027027026No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACCGCCGCTGCATTTCTTCTCTTGC12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGCGGACGGC12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGGAATGATA12.7027027027027026No Hit
GTGGCCCCTTGGCCCCAGACGTCCATACCGTAGCCCCCCCCCCCCAATAA12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGACGATACTTCGGGGGCA12.7027027027027026No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGGAGTAGTAGTCGCTGGGTTA12.7027027027027026No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)