FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132379

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132379
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences162
Sequences flagged as poor quality0
Sequence length208
%GC45

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGT95.555555555555555No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTG84.938271604938271No Hit
TTTTTATTTTTATAAATAGTAAGGATTGTGTTTTTTTGTATGGTGTTTTG42.4691358024691357No Hit
ATTGTAGAAAGAGTTTGGGAGGTTAAGGTTGTAGTGAGATTTGATTGAGT31.8518518518518516No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAC31.8518518518518516No Hit
AAGCCATCAGGGACCGGTTCTCCCGGCTGCGGTACCAGAGTGAGGCGTAG21.2345679012345678No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTAGGAGGATTGTTTGAGT21.2345679012345678No Hit
GTTTGTAATTTTAGTTTTTTGGGATATTGAGGTGGGTAGATTATTTGAGG21.2345679012345678No Hit
TTTTTATTTTTATAAATAGTAAGGATTGTGTTTTTTCGTATGGCGTTTTG21.2345679012345678No Hit
ACAGGAGACTGTGACAGTGACGGTGACCACAGACAGGCCACCCAGGGCTC21.2345679012345678No Hit
ATTGTAGAAAGAGTTTGGGAGATAGAGTAAGATTTAGTTTTAAAAAATAA21.2345679012345678No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTACA21.2345679012345678No Hit
ATTGTAGAAAGAGTTTGGGAGATTGAGGGGCGTAGAGTGGGGTTGGATTA21.2345679012345678No Hit
GTTTGTAATTTTAGTTTTTGGAATTATTGATTTGTTTTTTGTTTTTATAA21.2345679012345678No Hit
AGGGTTCCCTGGCCCCAGTAGTCACCCTAGTAGCCATTATCTCTGCCTCG10.6172839506172839No Hit
ATTGTAGAAAGAGTTTGGGAGATAGAGTGAGATTGTTAAAAAAAAAAAAA10.6172839506172839No Hit
TGCAGGTTACCTGTTCCCACACACTCGCTGGGCCCCAGCAAGGCGCCACG10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTTGAGTAGTTAGGATTATAGGTGTGTATTAAT10.6172839506172839No Hit
GTTTGTAATTTTAGCCCTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGT10.6172839506172839No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAACTTCG10.6172839506172839No Hit
GTTAAAATTTTGGGTTTAGGTGATTTTTTTGTTTTAGTTTTTCGAGTAGT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGACTAATACACCTTATAATCACTCCC10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTAGGAGAATCGATTGAAT10.6172839506172839No Hit
GGGGTTCCCCGGCCCCAGGGGTCGAACCAGTTGTACAGTTCTGCTGTTAT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGACTCCGTAACCAGCCCCCTATCTCT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACTGGGACGAACGAAGCCA10.6172839506172839No Hit
ACAGACAGGCCACCCAGGGCTCGGGCTGGGTATGGTGGGCTCTGGTGGGA10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTACTACAAACCATAGCTGTATCC10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCACCATAGTTACCTGAACCATAGTACCG10.6172839506172839No Hit
ATTGTAGAAAGAGTTTCGTATTTGTTTTATTTTGTTGTTTTTTATGTTTT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCCCCCCGACTCCCCGAACCATAG10.6172839506172839No Hit
ATTGTAGAAAGAGTTTGGGAGGTGATTTGGGTTTGAGAAGTATTGTAGTT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCTAACGACCTAGCAGAAGCACTTCTACT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGGGTAACCATAGCTTTATCCTCGGCT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGCCCTCCGTACACTACTACT10.6172839506172839No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGACGTTTTG10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCTCCGCTCCGACCGCTCCAAAAATCGTA10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCGACAGCTGCCACGATGGTAGGATTTCT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACTCGTTGCAGCCACCACTCCT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAAGCAGCCTAACAGCCTCCTCCGACA10.6172839506172839No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTATTGTTCTGG10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACCGCCGGAGCCTCTACGGGGTAGG10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTGGGTAGATTACGAGGTT10.6172839506172839No Hit
ATTGTAGAAAGAGTTTGGGAGATTATTGCGGTGGTTGAGTTTTATAAGTT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTTGTTACCGACGGAGCTTCAGTG10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAACGCCCTCCCAGAACCTGTTGCTGCT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCCAGACCGCAACTGGTGCTCATACTTCC10.6172839506172839No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTCGTAAGGTGAGACGTTTCG10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCCGCCCGTGACCCTCCTACAGCA10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTCGAGGTGGGTGGATTATGAGGTT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGCCCCTTGGGGTGGTCACTGC10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCTCCCCTGACGGCTCGCACA10.6172839506172839No Hit
ATTGTAGAAAGAGTTTGGGGGAGGATTAAATGAGATAGATGTAAAGTTTT10.6172839506172839No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCCCCGATCGAATAACCACT10.6172839506172839No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTATCCAGT10.6172839506172839No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTCAAGGGATACCCC10.6172839506172839No Hit
ATTGTAGAAAGAGTTTGTAAAGAGTTTTAAGTTTAAGATAAAAATGTATT10.6172839506172839No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCATGGGAATAACCACTCCA10.6172839506172839No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCATAAGGCTGTCGAGCCCC10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTATGGAATAAATTCCCGAA10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTTGGGAGTTTGAGGTATGAGAATTGTTTGAAT10.6172839506172839No Hit
GTGGTCCCTTTGCCCCATACGTCCATGTAGTAGTAGTAGCCCTTGCGGAC10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCATCTCGTACTAC10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAATTGGCAGTAATAACCACTACCACC10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCTCTCGTTAGGTCTAGCAGC10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTTAGGAGATCGAGGTGGGTGGATTATTTGAGG10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTCGTACAAACGTAACCAGTC10.6172839506172839No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTCGTAAGGCGAGACGTTTCG10.6172839506172839No Hit
GGTTTTTGAGGAATTGGATTTCGAGTTTGTTCGTAAGGCGAGACGTTTCG10.6172839506172839No Hit
ATTGTAGAAAGAGTTTGGGAGATAGAGTAAGATTGTTTTAAATAAAGTAA10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTACCCGAAGCAGCTACCACCACT10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTTGGAAGGTTAAATTAGGTGGATTATGTGGTT10.6172839506172839No Hit
GTTAAAATTTTGGGTTAAGGAGATCGACGTGTTGTTGTTTGTATTAAGAG10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTCGGGAGGTTGAGGTAGGAGAATTGTTTGAAT10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTCGAGGCGGGTGGGATTTTTTCGG10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTGGGCGTAATCATAACCCACGGACCCCCTATT10.6172839506172839No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTGGTAGTAATTAGC10.6172839506172839No Hit
GTTTGTAATTTTAGTATATTGGGAGGTTAAGGCGGTCGGATTATTTGAGT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCCTCATCGAACCATAATC10.6172839506172839No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGCTCGTATAATA10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGAGATCCTCGATAACCTCTCCAAAAATCGCCG10.6172839506172839No Hit
TTTTTATTTTTATAAATAGTAAGGATTTTGGATTTTTTTTAGGAATAATG10.6172839506172839No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAATAGTAGTGCCCATCTGTCCA10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCCCCCAGCAATACAATAATACAC10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTTCTTATCACTGCCACA10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTCGAGGTAGGTAGATTGTTTGAGG10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTAGGAGAATTGTTTGAAT10.6172839506172839No Hit
TTTTTATCTTTATAAATAGTAAGGATTGTGTTTTTTTGTATGGTGTTTTG10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCAACCCCTCAGGTCCAGCA10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGCAACCCGGGCCTATCGTACAGCA10.6172839506172839No Hit
GGTTTTTGGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTGT10.6172839506172839No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTCGTAAGGTGAGATGTTTTG10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTCGAAGTGGGAGGATTATTTGAGT10.6172839506172839No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCAGCCAAACTAACCACATCCTC10.6172839506172839No Hit
TTTTTATTTTTATAAATAGTAAGGATTGCGTTTTTTCGTACGGCGTTTCG10.6172839506172839No Hit
GTTAAAAGTTTGGGCTAAGGAGATCGATGCGTTGTCGTTTGTATTAAGAG10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCATTTATTACTTTGCCCGCAAAT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGCTCATTATTGTCCCCCACCG10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGCATAATAAAAGTGACAGTAGTC10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCATTCGACCTCGCACAGTAATACACAGC10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACTACCCCATGTGGTACTACTAATA10.6172839506172839No Hit
TTTTTATTTTTATAAATAGTAAGGATTGAATAGTTGTTTGAAGTTTTTGA10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGAGTCGAACCAAGACAGGAGAGTACCCCTACA10.6172839506172839No Hit
ATTGTAGAAAGAGCCCGGGAGAGGTTGATAAAGTTTAGGTTTAGAGATTA10.6172839506172839No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGCCGTAGTAGTAGTGGGCGCGAGG10.6172839506172839No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTCGTAGTAGTACCCTGCGTCCCG10.6172839506172839No Hit
GTTAAAATTTTGGGTTAAGGAGATCGACGCGTTGTCGTTTGTATTAAGAG10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCGAACCAGCCACAGACGCTAAAATCTCA10.6172839506172839No Hit
ATTGTAGAAAGAGTTTGGGAGATTGAGGGGTGTAGAGTGGGGTTGGATTA10.6172839506172839No Hit
GGTTTTTGAGGAATTGGGGTTTGATATTTTTGGTTGAGGGAATTTATTGT10.6172839506172839No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGCTGTTTTG10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAATGTTTCCCATAGTAATCACACTGGC10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCGTCCCTGTACCAGTGAA10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCAAACCACTGCCCCCACA10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGGGCCATAGTAGCCACTATATCCATG10.6172839506172839No Hit
ATTGTAGAAAGAGTTTGGGAGATTATATATAGTGTTGTGGGTAGAGTATG10.6172839506172839No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAAAGGTCCCGGCC10.6172839506172839No Hit
ATTGTAGAAAGAGTTTGGGAGATAAGAGTAAAATTTTATTTTAAAAAAAA10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTCCCACCTGCTTGGGTGAT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGAGTCAAAGTAGCCCTGACCAGTACAACAATC10.6172839506172839No Hit
GTTAAAATTTTGGGTTATTTTTTGAATTTTTATTTTGATCGGAAGAGCGG10.6172839506172839No Hit
GTGGTCCCCAGGCCCCAAAAAGAGTTTTAAGTCGGGGGTCACTTTAGAAT10.6172839506172839No Hit
ATTGTAGAAAGAGTTTGGGTTAGGAATGTTGTTGTTATTTTTGATTTTTT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGCTCTGTCGCAGCTGGCTCAG10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTCGGGAGGTTAAGGTAGGAGAATCGTTTGAAT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGTCCCCTTTGAAGCCACTGCTATCCCATAT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGCTCTATCCTGGCCGCTTGTG10.6172839506172839No Hit
GTGGTCCCTTGGCCCCAGACGTCAATACCGTAGTAGTAGTTGATATGACG10.6172839506172839No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTCGAGGTCGGTGGATTATGAGGTT10.6172839506172839No Hit
AGGGTTCCCTGGCCCCAGTAGGCAAGGTAGTAATAACCACTACTATCCGT10.6172839506172839No Hit
TTTTTATTTTTATAAATAGTAAGGATTGCGTTTTTTTGTATGGTGTTTTG10.6172839506172839No Hit

[FAIL]Adapter Content

Adapter graph