FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132380

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132380
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45
Sequences flagged as poor quality0
Sequence length208
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAACCTGG24.444444444444445No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAATTGGGGTTGTAGGGTACTGTATCC24.444444444444445No Hit
AGGGTTCCCTGGCCCCAGTAGCCTTCCTAAACCATAGTTGCATCCATTCA12.2222222222222223No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCTGTTTGATAGCAGCTGGT12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGGTCTCCCTCCCCTCCCA12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTAAAACCATAGCTGCCTCC12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATAGCGTAGTAGTGGTCATACCTGAA12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTTTCGAAGATTACCACC12.2222222222222223No Hit
AGGGTTCCCTGGCCCCACTGGTCAAAGTAGGAACTACTCCAACCCACACC12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCCCCCCACCGAGCACTCTGCCC12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCGAGGGT12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGGGGGGAGGAAGATCTTTCGCACAGTAATACAC12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAATTTAACGTAATCATAATACACTCC12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTGCTTAGCAGCTGG12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTTCCAATAGCAGTCACCACC12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTTGAATATAGCAGC12.2222222222222223No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTACTCAATCCACAGGAGGTA12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGAATAGCTGTATCCGCGGCTTTCTCG12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGCCCCCACCACCACGAAGGTC12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTATTTATA12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTTGTAGTGTACATA12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAATTCTGTAGGGCTCTCGC12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTCCCTCCCAAA12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTCGGTCGTCGCAGCTTTCACTAT12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGTATAGGGAGAGAGTAGTAGCTCCTGGCCCCCC12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTCTCTCGCACAGTA12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGATACACCATTAGTACAATATCCTAC12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGTAGTCCGTCGTAGCAGCTACCACCACTACAAT12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTGTTCCCCCTCACCCGGGTT12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATCCCC12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGCCCCCCCTCATAGCTGTATCCCAA12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGATTCTATC12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATATCGTACTGCCCAGAGCGAGAGCT12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGGCCCAAAT12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACTCTTTATACCAGCCACT12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTGGGTACCAGCCACTGCTATCGA12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGGAGTCAAAGTAATAATTATCTCTTGCACGGTA12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTCCCCCCGGAGAGAAATCGA12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTATAGGTCGTAACCATAGCT12.2222222222222223No Hit
GTTGTCCCTGGGCCCCACATATCAAAAGCATCTCCCGGGGTGGATTTCGC12.2222222222222223No Hit
AGGGTTCCCTGGCCCCAGTTTTTGCCCAGAAACCGTGGGGGCGCGAACGT12.2222222222222223No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGTATTTCCC12.2222222222222223No Hit
GTGGTCCCTTGGCCCCAGACGTCCATATCATAGTATTAGTAGTCTTAACG12.2222222222222223No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)