FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132381

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132381
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159
Sequences flagged as poor quality0
Sequence length208
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCGAGGGT7446.540880503144656No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTG85.031446540880504No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGT63.7735849056603774No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTAATAACCAGTCAAAATATC63.7735849056603774No Hit
GTGGCCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCGAGGGT21.257861635220126No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGATATAACCTCACTACTATACCCT21.257861635220126No Hit
GGTTTTGAGGAATTGGGGGTTATGATTGTAGAAAGAGTTTGGGAGATCGG10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTGGTAGTAGTGCCCGAGGGT10.628930817610063No Hit
ACAGGAGACTGTGACAGTGACGGTGACCACAGACAGGCCACCCAGGGCTC10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGAGGGCCGA10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTACTCAGCCCC10.628930817610063No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCAGTATGCCAGCCACTGCT10.628930817610063No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAATATTCAGCGGTCCAGCTGTTCCG10.628930817610063No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATCGTGGGTGT10.628930817610063No Hit
ATTGTAGAAAGAGTTTGGGTTTTAGTATTAGTAGAGAGTTTGATAGGCGT10.628930817610063No Hit
GGTTTTTGAGGAATTGGATTTCGAGTTTGTTCGTAAGGTGAGATGTTTTG10.628930817610063No Hit
CCCAGGCCCCTCTCCTCTCAAGGGGCTGAGGGTGGAGCAGGGACGGAGGG10.628930817610063No Hit
AGGGTTCCCTGGCCCCAGTAGTCAATTGTACCAGCCACTGTTCTCTCGCA10.628930817610063No Hit
GTTAAAACTTTGGGCCATTTTTTGAATTTTTATTTTGATCGGAAGAGCGG10.628930817610063No Hit
TTTCCTGTGGGGGCCATCTGTCATCCTGGCTTTGGGCGGGAGCCAGACAC10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGGGGGTTATA10.628930817610063No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTATAACTCCAGAGGATAACTCCC10.628930817610063No Hit
AGGGCTCCCTGGCCCCAGTAGTCAAAGCCATAACCAGTCCAAAAACCCTT10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCGCGGGT10.628930817610063No Hit
GTGATCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCGAGGGT10.628930817610063No Hit
ATTGTAGAAAGAGTTTGGGAGAGAGAGGGAGATTTAAGGTTTTTGTAGTG10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACAGTAGTAGTAGTGCCCGAGGGT10.628930817610063No Hit
GTGGTCCCTTTGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCGAGTGT10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGAAGCTGCTGCTATAGGA10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATCCCGTAGTAGTAGTGCCCGAGGGC10.628930817610063No Hit
AGGGTTCCCTGGCCCCAGTAGCCGGAGTAGCTCCCACTGGGATCTCTCGC10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATGACC10.628930817610063No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTTATGGGGCAT10.628930817610063No Hit
ATTGTAGAAAGAGTTTGGGAGTTATTATTAATATTTTTGATTTGTTTTTA10.628930817610063No Hit
CCATCATAGCCCTGCTGACCCTGTGACCTTGTGGCAGCCCCTCTGGCCCC10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTACCAGGAATA10.628930817610063No Hit
ATTGTCCCTTGGCCCCAGATATCATATCCAAATACTCGTTCTCTCGCACA10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTACTGCCCGAGGTC10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTGGAATGA10.628930817610063No Hit
ATTGTCCCTTGGCCCCAGACATCAAAAGAGTCACCATGTTGGAGTGGAGT10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATCCCGTAGTAGTAGTGCCCGAGGGT10.628930817610063No Hit
AGGGTGCCACGGCCCCAGAGATCGAAGCACCAGTTTAGTAGCTGGTACTC10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTACCTTGTGCAGCTGGT10.628930817610063No Hit
GTTAAAATTTTGGGTTAAGGAGATCGACGCGTTGTCGTTTGTATTAAGAG10.628930817610063No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTACGAGCTCCCACTATA10.628930817610063No Hit
TTTTTATTTTTATAAATAGTAAGGATTGCGTTTTTTCGTACGGCGTTTTG10.628930817610063No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAC10.628930817610063No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATTTTTCG10.628930817610063No Hit
ATGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCGAGGGT10.628930817610063No Hit
TCTGGCGGGTGTAGAAGAGCTCATGCTTCATTGAGGGGGTGGGGGGCACC10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGCGGGGGGATAACCACTA10.628930817610063No Hit
AGGGTTCCCTGGCCCCAGGGGGCCGATAACTCCCCGAACCAGCCCCTCAC10.628930817610063No Hit
AGGGTTCCCTGGCCCCAGTAGTCACCTCATTGTAGCCATCTACATCTCTC10.628930817610063No Hit
AGGGTTCCCTGGCCCCAGTAGTCACCTCATTGCCACCATCTACATCAGTC10.628930817610063No Hit
GTTAAAATTTTGGGTTATTTTTTGAATTTTTATTTTGATCGGAAGAGCGG10.628930817610063No Hit
ATTGTAGAAAGAGTTTGGATTATTAGCGTGAATTATTGCGTTTAGTTGTT10.628930817610063No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTCGGCGGATTGTGGGTGT10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGAATTTGGG10.628930817610063No Hit
GTTAAAATTTTGGGTTAAGGAGATCGATGCGTTGTCGTTTGTATTAAGAG10.628930817610063No Hit
TTTTTATTTTTATAAATAGTAAGGATTGCGTTTTTTTGTACGGTGTTTTG10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGCAGTAGTAGTGCCCGAGGGT10.628930817610063No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACTAACCTGTCATACTATC10.628930817610063No Hit
ATTGTCCCTTGGCCCCAGATATCAAAACCTAACCCCGCATCCATAGTAAT10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTCCATCCCGCTGAA10.628930817610063No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCGAGGGC10.628930817610063No Hit
AGGGTTCCCTGGCCCCAGTAGTCCCAGTGCATTTTGCTATACGCTTCTGG10.628930817610063No Hit
TTTTTATTTTTAAAAATAGTAAGGATTGTGTTTTTTTGTATGGTGTTTTG10.628930817610063No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)