FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132390

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132390
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46
Sequences flagged as poor quality0
Sequence length208
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGTTCCCTGGCCCCAGTAGTCAAACGGACTCCCCGGCGACCAAACCCC24.3478260869565215No Hit
AGGGTTCCCTGGCCCCAGAAACTATAGTTAGCACAGTAATATAAGGACGT12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTATCGGGAACCGTAGTCGGTCGG12.1739130434782608No Hit
CCATCATAGCCCTGCTGACCCTGTGACCTTGTGGCAGCCCCTCTGGCCCC12.1739130434782608No Hit
AGGGATCAAAGGAAGAAGGGGGAGAAGAAGGAGATAGCAGAGGGTAATAG12.1739130434782608No Hit
AGGGTTCCATGGACTCAGTGGCGGGTGCTTACTCCAAAGGTAATCGTAAA12.1739130434782608No Hit
AGGGTTCCATGGACTCAGGGGTGGAACCAGGAGATAGCAGCTGGTATTAC12.1739130434782608No Hit
AGGGGAGAATGGGAAAAGGAGGGAGGGAGAAGAGAGAGAAGGGAGGAAAA12.1739130434782608No Hit
GAGGGAGAAGGGGAAAAGAAGGGAAAAGAGAAGAAGAAGAAGAAAGGACG12.1739130434782608No Hit
GTGGTGCATTGGATAGAGACGTACATATTGTAGTAGTAGTAGTATCTTAA12.1739130434782608No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATGTTG12.1739130434782608No Hit
AGGAAAGAAAGGAAACAAAGGAGAAAAGGGGAGAAAAGAAAGAGAAGAAG12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAC12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGTAATACCCCATGAGATTAC12.1739130434782608No Hit
ATTGTCCCTTGGCCCCAGATATAATAAGAATAATGGAGTAATTGAAAAAT12.1739130434782608No Hit
AGGGGGGAATGGAAGAAGAAGAGAAAGGAAAGAAAAAAAAAAGGAGAAAA12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAAACAGGAGATGGAAGCAGGAAATAA12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGGGGTCAAAACAGTCCAAAGAGGCTAGAATAAG12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGTGGTGGTAGTATTTATTTTTCGGCGGGAGCAG12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGTACTATCATA12.1739130434782608No Hit
AGGGGGAAATGGAAACAGGAGGAAAGGAGGGAGCACTAAAAGGGAAAAGA12.1739130434782608No Hit
GAAGAAGTGACAGAATGTAAAGGAAAGGAAAGAAGAGAAGAAGAAGAAGA12.1739130434782608No Hit
AGGGGGAAAAGGGAGAAGAGAAAGAAGGAGGAGGAGGAGAGAGGAAAAGG12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGCGGAGCCAGCAGCTACACCCCC12.1739130434782608No Hit
GGATGAAATGACATGAGGCGCACGGGAGGCGGAAATTGAGTAAAGGCAGA12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACCCAGCCACTGCTATACCATCCTC12.1739130434782608No Hit
AGGGTGCCATGGACTCAGTGCTGGAAGTATTCATTTTTCGGAGGGAATAG12.1739130434782608No Hit
AGGGTTCCTTGGACACAGGGGTGGAACCAGGAGATAGCAGCTGGTAATAC12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGTAATGAAAGTGAGGAAAATCCAACAAAAGTGA12.1739130434782608No Hit
TATGGAAGACAAGCAGTGGGGATTGAGAAAGAGGAGAAATGAAAAAAGAA12.1739130434782608No Hit
AGGTAAAGAAGGTGACAAGAAGGAGAAAAAGAGGAAGGAGAAAAAAGAAA12.1739130434782608No Hit
AGGGCTCCCTGGCCCCAGTAGTCAAAGTAGTCCTCACCGGACGAGCTGAC12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACCAGCTGCTGCCAGAATC12.1739130434782608No Hit
AAGGAGAAGGAAAGAGAGGGGAGAAAAAAAAGAAGAGAGAAAAAAAAAGG12.1739130434782608No Hit
AGGGAGCACGGGGAAGGAGGGAAAGAGGAAGAAAGGAAGGGAAGGGAAAA12.1739130434782608No Hit
AGGGAGGCATGGAAGCAGGGGGAGAAAAAGGAGAGAAAAAAGAGGAGGAA12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGACCATCGTAGCCACTATATTCTTT12.1739130434782608No Hit
GGGGAAGAAAGGTAGCAGAAAGGGAAAAAGAAGAAGGAGGGGGAAGGAAG12.1739130434782608No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATCGCAGCTAGCACTAA12.1739130434782608No Hit
AAAGAAAAAGAAAGAGAGGAAAGGAGGGAGAGGGAGAAAGAAGAAATAGG12.1739130434782608No Hit
AGGGAGGAGTGGAAGCAGGGGAAGAAGGAAAAAAGAGAGGAAGGGAAGAA12.1739130434782608No Hit
AGAAGGAGATGGGGAAGGGAGAGGAGAATAGAAAAAAGAAGGACGGTAAA12.1739130434782608No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCACCGGGGCTGGGTGTACCAGC12.1739130434782608No Hit
AGGGTTCCATGGACACAGTAGTTCACCTACCAGCTGCTGCTAGGTTGATC12.1739130434782608No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTGCTCCACAAAACC12.1739130434782608No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)