FastQCFastQC Report
Tue 7 May 2024
EGAF00001132392

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132392
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences206
Total Bases42.8 kbp
Sequences flagged as poor quality0
Sequence length208
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCGCCTGCACTAAGAGAAACGCAACGAACAACTTTGTCAATGCATTGC3115.048543689320388No Hit
CGATGTATCCAAGTCTGACGGCCCCAGAAACGGGTGTGCAGGGCGCCCAT2713.106796116504855No Hit
GCCCTGTAATCCCAGCTCCCCGGGAGGCTGAGGTCGGCGGATCGTGGGTG2411.650485436893204No Hit
CGGGTCACCTTCTGAATTTTTACCTTCATAAACAGCAAGGACTGCGCTCT199.223300970873787No Hit
GCCCTGTAATCCCAGCTACTTGGGAGGCTAAGGCAGGAGAATCCTTGAAC41.9417475728155338No Hit
GCCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAA31.4563106796116505No Hit
GCCCTGTAATCCCAGCTACTCGGAAGGCTGAGGCACGAGAATTGTTTGAA20.9708737864077669No Hit
GCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTTGGT20.9708737864077669No Hit
GCCCTGTAATCCCAGCTACTAGGGAGGCTGAGGCACAAGAATCGCTTGAA20.9708737864077669No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCGAGGGT20.9708737864077669No Hit
GCCCTGTAATCCCAGCTACTAAGGAGGCTGAGGCAGGAGAATTTCTTGAA20.9708737864077669No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACAGTAGTAGTAGTAGTTTCTTCT10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGTCATCCTGGACGTAGAGGGGATATAAATA10.48543689320388345No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGGCCGTACC10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTATTCTAAGCATACACCACCAGT10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGGTTCCCGAAACCACTCCAAAAATC10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCACTTGAA10.48543689320388345No Hit
TGTCGCCTGCACTAAGAGAAAAGCAGAGGGAGATTTGAGACACACAGATA10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGCCACCCGGTAGCAGCTACCACCACTACAA10.48543689320388345No Hit
CGGGTCACCTTCTGACTTTTTACCTTCATAAACAGCAAGGACTGCGCTCT10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTGCTGGCAGTCCCTACGACT10.48543689320388345No Hit
GCCCTGTAATCCCAGCTCCCCGGGAGGCTGAGGTCGGCGGCCCGTGGGTG10.48543689320388345No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTATGAACTCCCCGA10.48543689320388345No Hit
GGTTTGTGGTATGATTGTAGAAAGAGTTTGGGAGTTCGGAAGAGCGGTTC10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTATTTTTC10.48543689320388345No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAAGTGGAGCT10.48543689320388345No Hit
ATTGTAGAAAGAGTTTGGGAGATTATTAGGATCTTTTTTTTAAGATGGTT10.48543689320388345No Hit
GCCCTGTAATCCCAGCACTTTGAGAGGCCAAGGTGGGTGGATCACGAGGT10.48543689320388345No Hit
GTCGCCTGCACTAAGAGAAACGCAACGAACAACTTTGTCAATGCATTGCA10.48543689320388345No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGTAACAGAC10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGTCGAAGTCTTACTATTTATGCGTGCCACT10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTACCCCCGACGACTACTCT10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGTCGATGATTGTAGCCATCTCTTCATACGG10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTCGGGGGGCTGAAGCAGGAGAACTGTTTGAG10.48543689320388345No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATTCCCCTTGACTCTCGCACA10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGGCGGATCGGCTCGCACATAACTAC10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAATAGTGGCACCCAAGAAG10.48543689320388345No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCAAATAGACGTCGTTCCAGTTC10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACAGTAGTAGTAGAAGTGATCCGT10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGAAGTACCAGCTGCT10.48543689320388345No Hit
AAAGCGGCATGGTCAATATAACCAGTAGTGTTAACAGTCGGGAGAGGAGT10.48543689320388345No Hit
TGTCGCCTGCACTAGAGAAACGCAACGAACAACTTTGTCAATGCATTGCA10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAACTGCTTGAA10.48543689320388345No Hit
CGATGTATCCAAGTTTGACGGCCCCAGAAACGGGCGTGCAGGGCGCCCAT10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAA10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGCCAAAGTACTATCAAAGCGCCTGCTGTCG10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACTCTGCCAGAACCGCTCTCGCCCA10.48543689320388345No Hit
ATTGTCCCTTGGCCCCAGACACGAAAAGAATCATATGAGGTGCTATAGTA10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGGAGTCCACCGGGTACCAGGTGTCATATTTCGT10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGGGGTCGATCCACCAGCCCCTGGTCCTGCAACA10.48543689320388345No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGGGATAGTGGAC10.48543689320388345No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTCGAGGTAGGTAGATTATTTGAGG10.48543689320388345No Hit
GCCCTGTAATCCCAGCTCCTTGGGAGGCTGAGGCAGGAGAACTGCTTGAA10.48543689320388345No Hit
GTTAAAATTTTGGGTTATTTTTTGAATTTTTATTTAGATCGGAAGAGCGG10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTGTTCAAAGTAGTACGAACTCCCTGAACCATA10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGGACGATTATTCCTCCCACAGTA10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCTCCCGCATTGGTTTCGCCCTCT10.48543689320388345No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCCTCCGAGCAGCTACCACCACT10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATATAGTAGTAGGCGTACTTCACCAA10.48543689320388345No Hit
CGACGTATCCAAGTCTGACGGCCCCAGAAACGGGTGTGCAGGGCGCCCAT10.48543689320388345No Hit
CGGGTCACCTTCTGAATTTTTGCCTTCATAAACAGCAAGGACTGCGCTCT10.48543689320388345No Hit
GCCCTGTAATCCAAGCTCCCCGGGAGGCTGAGGTCGGCGGATCGTGGGTG10.48543689320388345No Hit
CGATGTATCCAAGTCTGACGGCCCCAGAAACGGGTGTGCAGGGCGCCCGT10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTGAGAATAACTCCCTGAACTATA10.48543689320388345No Hit
GCCCGTAATCCCAGCTCCCCGGGAGGCTGAGGTCGGCGGATCGTGGGTGC10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGGCGACCGATGCCAGGCACAGCC10.48543689320388345No Hit
CGATGTATCCAAGTCTGACGGCCCCAGAAACGGGTGAGCAGGGCGCCCAT10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTGGGTAGTAGGCCC10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCGCTCGGTA10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTGATCATA10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGGGAATCCCTTGAA10.48543689320388345No Hit
TGTCGCCTGCACTAAGAGAAACACAACGAACAACTTTGTCAATGCATTGC10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTACCGCTGCCT10.48543689320388345No Hit
GCCCTGTAATCCCAGCTATTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTCGAGGGGGTAACC10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTAGGGAGGCTGAAGCAGGAGGCGAAGGTTGC10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGGCATTCGG10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGGGGTCGATCCAGTATCCGTCGCACCTACCACC10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATATCGTAGTAGTAGTAGCCACTGTG10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGCCGGGAGGGGAGTA10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTCGGGAGGCTGACGCAGAAGAATTGCTTGAA10.48543689320388345No Hit
CGATGTATCCAAGTCTGACGGCCCCAGAAACGGGTATGCAGGGCGCCCAT10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGAAGGCGTCGCAGCCGCCTCT10.48543689320388345No Hit
GTTAAAATTTTGGGTTAAGGGTTATTTTTTGAATTTTTATTTAGATCGGA10.48543689320388345No Hit
AGGGTTCCCTGGCCCCAGTAGTCCCAACCGTTCTGCGGCGTTGGGGGAAA10.48543689320388345No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGGAGTAGGTATAAAC10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTCAGGAAGCTGAGGCAGGAGAATTGTTTGAA10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTCAGGGGGCTGAGGCAGGACAATCACTTAAA10.48543689320388345No Hit
CGGGTCACCTTCTGACTTTTTACCTTCATAAACAGCAAGGACTGCTCTCT10.48543689320388345No Hit
CGATGTATCCAAGTCTGACGGCCCCAGAAACGGGTGTGCAGGGCGCCAAT10.48543689320388345No Hit
CGGGTCACCTTCGAATTTTTACCTTCATAAACAGCAAGGACTGCGCTCTT10.48543689320388345No Hit
ATTGTAGAAAGAGTTTGGGAGGTAAAGGTTGCGATGAGTTAAAATTATAT10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTTGGGAGTCTGAGGTGGGAGGATGGCTTGAG10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGCA10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTGGGAGGCTGAGGCAGGAGAATCGCTTGAAC10.48543689320388345No Hit
AGGGTTCCGTGGCCCCAGTAGTCAAAGGCAATATATGCACCATAGCAGGT10.48543689320388345No Hit
GCCCTGTAATCCCAGCTACTCCAGAGGCTGAGGCAGGAAAATCACTTGAA10.48543689320388345No Hit
GCCCTATCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATTGCCTCAACCC10.48543689320388345No Hit
GTAGTCCCTTGACCCCAGACGTCCATACCGTGGTAGTACTTGCGACCGTG10.48543689320388345No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)