FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132393

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132393
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94
Sequences flagged as poor quality0
Sequence length208
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTACA33.1914893617021276No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGT22.127659574468085No Hit
ATTGTAGAAAGAGTTTGGGAGACGAATTGGTAAAAAATTTTTATTTTTTT11.0638297872340425No Hit
GATGCAAAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTT11.0638297872340425No Hit
AGCACCAGCACGCTCCCAAGCATTAAGCTCAGGAAATGCAGCAGCAAGAT11.0638297872340425No Hit
AACCGAAGAAGACTCAAAGCGAACCAAACAGGCAAAAAATTTAGGGTCGG11.0638297872340425No Hit
GAGATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAAC11.0638297872340425No Hit
TTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC11.0638297872340425No Hit
GTCTTCTCGTTCTCTAAAAACCATTTTTCGTCCCCTTCGGGGCGGAGGTC11.0638297872340425No Hit
TAAGTCAAAGCACCTTTAGCGTTAAGGTACTGAATCTCTTTAGTCGCAGT11.0638297872340425No Hit
AGGGAAGGAGTAAAAGAAAGGAAGAAGAAAAAAAAAAAAAAGGAGAGGGG11.0638297872340425No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAACCGCAATGAAAGAAGATTGAGAA11.0638297872340425No Hit
CCACTGTTCACCATAAACGTGACGATGAGGGACATAAAAAGTAAAAATGT11.0638297872340425No Hit
TGTTCCAAGTATCGGCAACAGCTTTATCAATACCATGAAAAATATCAACC11.0638297872340425No Hit
CACACCAAGCTCAGAGAGGGCAGGGGTGGGAAGGAGACATCAGATGTGGG11.0638297872340425No Hit
AAGTCCAACCAAATCAAGCAACTTATCAGAAACGGCAGAAGTGCCAGCCT11.0638297872340425No Hit
TTGGTGCAATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGGGGCGCCATG11.0638297872340425No Hit
GAGGCGGCTTTTTGACCGCCTCCAAACAATTTAGACATGGCGCCACCAGC11.0638297872340425No Hit
CATTCAGATGGATACATCTGTCAACGCCGCTAATCAGGTTGTTTCTGTTG11.0638297872340425No Hit
AAGTAAAAATGTCTACAGTAGAGTCAATAGCAAGGCCACGACGCAATGGA11.0638297872340425No Hit
CCAAACCATGAAACCAACATAAACATTATTGCCCGGCGTACGGGGAAGGA11.0638297872340425No Hit
TGCAAATCACCAGAAGGCGGTTCCTGAATGAATGGGAAGCCTTCAAGAAG11.0638297872340425No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGACTCGACCCCCTCGTATAGC11.0638297872340425No Hit
CCTCAATAGCAGGTTTAAGAGCCTCGATACGCCCACAGTCAAAATAATCA11.0638297872340425No Hit
TGCTGGAGCGTCGTGCCAGCATGGGCTGTGGCAACCACGTGGGCCAGCAG11.0638297872340425No Hit
TTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACAT11.0638297872340425No Hit
CGTATGCCGTCTTCTGCTTGAAAAAAAGACTTCCTAGTTGGTCAGTACGG11.0638297872340425No Hit
CGAACAAGCGCAAGCGTAAACATAGTGCCATGCTCAGGAACAAAGAAACG11.0638297872340425No Hit
AGGGGACGAAAAATGGTTTTTAGCGAACGAGAAGACGGTTACGAAGTTTT11.0638297872340425No Hit
AATGCTTAGGGATTTTATTGGTATCAGGGTTAATCGTGCCAAGAAAAGCG11.0638297872340425No Hit
AGAAGGTGATAAGCAGGAGAAACATACGAAGGCGCATAACGATACCACTG11.0638297872340425No Hit
GATGCCCAGAGATTAGAGCGCATGACAAGTAAAGGACGGTTGTCAGCGTC11.0638297872340425No Hit
ATGCCACTCCTCTCCCGACTGTTAACACTACTGGTTATATTGACCCTGCC11.0638297872340425No Hit
TCTTGGAAGAGATTCTGTCTTTTCGTATGCAGGGCGTTGAGTTCGATAAT11.0638297872340425No Hit
TCCTTCATGAACTTAATCCACTGTTCACCATAAACGTGACGATGAGGGAC11.0638297872340425No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACGACAATGAGGGAGGCTGATATAA11.0638297872340425No Hit
TAGAAATGCTACAAGCCTCAATAGCAGGTTTAAGAGCCTCGATACGCTCA11.0638297872340425No Hit
ACCTTTAGCGTTAAGGTACTGAATCTCTTTAGTCGCAGTAGGCGGAAAAC11.0638297872340425No Hit
CTTTACCAGCTTTAGCCATAGCACCAGAAACAAAACTAGGGACGGCCTCA11.0638297872340425No Hit
ACTTAAGTGGCTGGAGACAAATAATCTCTTTAATAACCTGATTCAGCGAA11.0638297872340425No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTGATGATAACCACTACT11.0638297872340425No Hit
CTACCTGTAGGAAGTGTCCGCATAAAGTGCACCGCATGGAAATGAAGACG11.0638297872340425No Hit
AAGAGCCATACCGCTGATTCTGCGTTTGCTGATGAACTAAGTCAACCTCA11.0638297872340425No Hit
GGCGTTATAACCTCACACTCAATCTTTTATCACGAAGTCATGATTGAATC11.0638297872340425No Hit
AGGGTTCCCTGGCCCCAGAAAATAACTCCCCGAACCATAGTAATGGGGTC11.0638297872340425No Hit
GTTAAAATTTTGGGTTGGGTTATTTTTTGAATTTTTATTTTGATCGGAAG11.0638297872340425No Hit
AGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATGACAAATCTGTC11.0638297872340425No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTACCAGCT11.0638297872340425No Hit
ACAAAGAAACGCGGCACAGAATGTTTATAGGTCTGTTGAACACGACCAGA11.0638297872340425No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTCCTATGGCCGGACGAA11.0638297872340425No Hit
AGGGTTCCCTGGCCCCAGTAGCCGTAATAACTCCCCGAACCATAGTACGA11.0638297872340425No Hit
AACGCGAACAATTCAGCGGCTTTAACCGGACGCTCGACGCCATTAATAAT11.0638297872340425No Hit
CAGCCATATAACTGGTAGCTTTAAGCGGCTCACCTTTAGCATCAACAGGC11.0638297872340425No Hit
AGGGTTCCCTGTCCCCCGTAGTCAAAGTAGTAACTCCCCGTAACTATATC11.0638297872340425No Hit
ATTAACTTCTCAGTAACAGATACAAACTCATCACGAACGTCAGAAGCAGC11.0638297872340425No Hit
CTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTAT11.0638297872340425No Hit
CAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGA11.0638297872340425No Hit
AGCTTTACCGTCTTTCCAGAAATTGTTCCAAGTATCGGCAACAGCTTTAT11.0638297872340425No Hit
ATGCTTAGGGATTTTATTGGTATCAGGGTTAATCGTGCCAAGAAAAGCGG11.0638297872340425No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCGATGATGGTAGTACCACC11.0638297872340425No Hit
ACTAAAAACCAAGCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAA11.0638297872340425No Hit
GGTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGC11.0638297872340425No Hit
GCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAA11.0638297872340425No Hit
AAGGCCACGTCGCAATGGAGAAAGACGGATAGCGCCAACGGCGTCCATCT11.0638297872340425No Hit
CCCCCAACTTGATATTAATAACACTATAGACCACCGCCCCGAAGGGGACG11.0638297872340425No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAC11.0638297872340425No Hit
AGGGTTCCCTGGCCCCAGGAGTCGAACCACCCCCTCATGGTACTACTTCT11.0638297872340425No Hit
CTGGCGGCGATTGCGTACCCGACGACCAAAATTAGGGTCAACGCTACCTG11.0638297872340425No Hit
AGCTCTTTCTGATTGTCCAGTTGCATTTTAGTAAGCTCTTTTTTATTCTC11.0638297872340425No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGAAAAGCCCGCCCTGCGTCTCAAG11.0638297872340425No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTATTCACCAGT11.0638297872340425No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCTCCCCCATCTCTCGCACAGTA11.0638297872340425No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCTTCATCTCTCGCACAGTAATA11.0638297872340425No Hit
CCATCTGAATGCAATGAAGAAAACCACCATTACCTGCTTTTACCGTTAAA11.0638297872340425No Hit
CCTGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCCGACTACCCTCCCGACT11.0638297872340425No Hit
TGAGCCGCTTAAAGCTACCAGTTATATGGCTGCTGGTTTCTATGTGGCTA11.0638297872340425No Hit
AAACGGAAACCATAACGAGCATCATCTTGATTAAGCTCATTAGGGTTAGC11.0638297872340425No Hit
GCCAAGCATTGGGGATTGAGAAAGAGTAGAAATGCCACAAGCCTCAATAG11.0638297872340425No Hit
GCGAGCAGTAGACTCCTTCTGTTGATAAGCAAGCATCTCATTTTGTGCAT11.0638297872340425No Hit
GACAGATGTATCCATCTGAATGCAATGAAGAAAACCACCATTACCAGCAT11.0638297872340425No Hit
TAAATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAA11.0638297872340425No Hit
TCACCTTTAGCATCAACAGGCCACAACCAACCAGAACGTGAAAAAGCGTC11.0638297872340425No Hit
CGGCAGCAGCACATGGCACCCGCGCAGAGGCAGTGCAGGCAGCCCGGGCC11.0638297872340425No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTATGGGCCCTG11.0638297872340425No Hit
AGGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTT11.0638297872340425No Hit
CAATAGTCACACAGTCCTTGACGGTATAATAACCACCATCATGGCGACCA11.0638297872340425No Hit
AAGAAAAGCGGCATGGTCAATATAACCAGTAGTGTTAACAGTCGGGAGAG11.0638297872340425No Hit
AAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATT11.0638297872340425No Hit
TGGGGAGAGGAGTGGCAGAAAAAAAAGGAGTAAAGAACGAAAAGAAGGGA11.0638297872340425No Hit
AATTAGCATAAGCAGCTTGCAGACCCATAATGTCAATAGATGTGGTAGAA11.0638297872340425No Hit
AACATAATAAGCAATGACGGCAGCAATAAACTCAACAGGAGCAGGAAAGC11.0638297872340425No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)