FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001132428

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132428
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1038182
Sequences flagged as poor quality0
Sequence length300
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACCTAGCAGCT57811055.684841386192396No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGT15926815.341048101392627No Hit
CTTACCTGAGGAGACGGTGANCAGGGTTCCCTCCCCCCAACCTAGCAGCT200551.9317422186090685No Hit
NTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACCTAGCAGCT185711.7888000369877342No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT167631.6146494545272407No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT123151.1862081985624873No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACCTACCAGCT78450.7556478536518645No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC69180.6663571512509368No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC63430.6109718719839103No Hit
CTTACCTGAGGAGACGGTGANCAGGGTGCCCTGGCCCCAGTGCTGGAAGT58390.5624254706785515No Hit
NTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGT52640.5070401914115252No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG31590.3042819081818024No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGCTGGAAGT28680.27625214076144644No Hit
CTTACCTGAGGAGACGGTGACCAGGGCTCCCTCCCCCCAACCTAGCAGCT26060.25101571786064486No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACCTAGCAACT23650.2278020616808999No Hit
CTTACCTGAGGAGACGGTGACCACTAATGGGATTAGCCACTGTCCTTGAT21880.210753027889137No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGC20680.1991943609116706No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACCTAGCAGCC19460.18744304948457977No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAGCCTAGCAGCT16570.15960592651384825No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACCTAGAAGCT15760.15180382630405842No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACCTTGCAGCT14140.13619962588447884No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCGCCCCAACCTAGCAGCT14000.13485111473710776No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACCTAGCATCT13930.13417685916342223No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACCTAGCGGCT13920.13408053693861No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGGG13730.13225041466717782No Hit
CTTACCTGAGGAGACGGTGCCCAGGGTTCCCTCCCCCCAACCTAGCAGCT13230.12743430342656684No Hit
CTTACCTGAGGAGACGGTGACCAGGGTCCCCTCCCCCCAACCTAGCAGCT13150.12666372562806907No Hit
CTTACCTGAGGAGACGTGACCAGGGTTCCCTCCCCCCAACCTAGCAGCTG12710.12242554773633138No Hit
CTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACCTAGCAGCTG12410.1195358809919648No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACCGAGCAGCT11940.11500873642579046No Hit
CTTACCTGAGGAGACGGTGACCAGGGGTCCCTCCCCCCAACCTAGCAGCT11700.11269700303029719No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCCCCCCCCAACCTAGCAGCT11290.10874779181299617No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACCCAGCAGCT10920.10518386949494404No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCAACCTAGCAGCTG10910.10508754727013184No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTCCCCCCAACATAGCAGCT10760.10364271389794855No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)