FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences180
Sequences flagged as poor quality0
Sequence length151
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC2614.444444444444443No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC168.88888888888889No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG42.2222222222222223No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC42.2222222222222223No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG42.2222222222222223No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT31.6666666666666667No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT31.6666666666666667No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT21.1111111111111112No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT21.1111111111111112No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC21.1111111111111112No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC21.1111111111111112No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG21.1111111111111112No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCATAC21.1111111111111112No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCAAAC21.1111111111111112No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT21.1111111111111112No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGC21.1111111111111112No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACCAC21.1111111111111112No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACT21.1111111111111112No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATC21.1111111111111112No Hit
CTTANCTGAGGGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGTG10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCATGGTTCCCTTGCCCCAGTAGTCAAAGT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGACAAAAT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGAGGTCCATAG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGAGTTCCCGGGCCCCAGAAGTCAAAAC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCTAAAGT10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCCGGCCCCAGAGATCGAAGT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGAGATCAAAAG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATTAT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAAGGAATCACGA10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGA10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACAAA10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGTTGTCCCTTGGCCCCAGATGTCCAACT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGAAGTCAATAC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAACG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGTGGTTCCTTGGCCCCAGACCCCCATGT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACAC10.5555555555555556No Hit
ATTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCCTTT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGGGGTCCCTTTGCCCCAGAAGCCCACGA10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGGGGTTCCCTGGCCCCAGACGTCCATCC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGAA10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCCGCCTTCCCTGGGGGCTGGCGGATCCAA10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGCTTTTCTCGT10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCCTGGTTCCCTGGCCCCAGAGGTCCATAC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACCCT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATCC10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATCG10.5555555555555556No Hit
CTTACCTGAGGCGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACCAGC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATCG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGGGGTTCCCTTGCCCCAGTCGTCAATGT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGACGT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGACGTCCATAC10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCAGAA10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCACAG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGTGGTTCCCTGGCCCCAGACGTCCAAAC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATCC10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATGCT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCACAGGTGACTGGCACCGTGAGGGAGACC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGA10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCGTGGTACCTTGGCCCCAGACGTCCATAC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAT10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCTACTAACCTGTAC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAAACGTCCATAC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCTCAT10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCCCTT10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCATGGCCCCAGTAGTCAAAGT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACCA10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGAGGTCCATAC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGACGTCAAAAG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCAGGCCCCAGTAGTCAAAGC10.5555555555555556No Hit
CTTCCCTTCTTCTCCTTTTCCCTTTTTCCCTTTTCCCCCTTCTTCCCTCC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCGACCA10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGAATACCTTTCAGAGGTAGACAAGGA10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATGT10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGATTCAAAAT10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCTTGAG10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGACCATAC10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCCGGCCCCAGTAGTCAAAGT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAACC10.5555555555555556No Hit
CTTCCCTGGGGGCTGGCGGATCCAAGATCGGAAGAGCACACGTCTGAACT10.5555555555555556Illumina Multiplexing PCR Primer 2.01 (100% over 26bp)
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAGG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGCGGTCCCTTGGCCCCAGACGTCCATAT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCACGGTTCCCTGGCCCCAGTAGTCCAAGG10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTTAGCGT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGGAAA10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCCATGG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATTGG10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCTTGAG10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGGTCA10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCATTGTGCCTCGGCCCCAGATATCGAACG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAAGC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCTCCAGACGTCTATTC10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTCCCCGCACTAGGCACAGT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCAAAAG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAAGTCCATGG10.5555555555555556No Hit
ATTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCTCAC10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATACG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTTCCCCG10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACGT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCGCGGTCCCTTGGCCCCAGACGTCCATGC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAAAC10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAAGC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCGAAAG10.5555555555555556No Hit
CCTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCATC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCCGGCCCCAGAGATCGAAGC10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCTAATG10.5555555555555556No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACT10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATG10.5555555555555556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCGAACT10.5555555555555556No Hit

[OK]Adapter Content

Adapter graph