FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001132507

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132507
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences486220
Sequences flagged as poor quality0
Sequence length300
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT10868922.353872732507917No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCCCGG10009020.585331742832462No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCCCTC5640711.601127061823865No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTTATAAT468629.638023939780346No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCCATT75551.5538233721360701No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGCCCCCC62791.2913907284768211No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTTTTTT54501.120891777384723No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG54401.1188350952243842No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT53301.0962115914606556No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC44390.9129612109744559No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCCCCC41290.8492040640039488No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTTTCCCGG37660.7745465015836452No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGCCCCGG27770.571140635926124No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGCCCCTC21370.43951297766443176No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTTTCCCTC18710.3848052321994159No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCCCCG18690.3843938957673481No Hit
CTTACCTGAGGAGACGGTGACCACAGGAGACTGTGACAGTGACGGTGACC16990.3494302990415861No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCCCAC13960.2871128295833162No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCCCGC12170.2502982189132491No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCACCC12040.24762453210480853No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT11780.24227715848792727No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCCCGT11230.2309654066060631No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGC11100.22829171979762247No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGCCCCTA10800.22212167331660562No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGCTGGGA10620.21841964542799555No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCAGGC9980.20525687960182634No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCCCGA9890.2034058656575213No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGATGTCCCGG9250.19024309983135207No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGCTGTCCCGG8600.17687466578914895No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTTCCCCGG8210.16885360536382707No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTTGCCCCAGACGTCCATGT8170.1680309324996915No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGT7820.1608325449385052No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATAAT7670.1577475216979968No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCCCAG7070.14540742873596313No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAT6860.14108839619925137No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGCTGTCCCTC6760.13903171403891243No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGTCCCCT6530.13430134507013286No Hit
CTTACCTGAGGAGACGGTGACCGGGGTCCCTTTGCCCCAGACGTCCATGT6460.1328616675578956No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGA6210.12771996215704826No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCAATGT5980.12298959318826869No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTGCCGTAC5840.12011023816379417No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGATGTCCCTC5690.11702521492328576No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG5670.11661387849121797No Hit
CTTACCTGAGGAGACGGTGACCGTGGTTCCTTTGCCCCAGACGTCCATGT5120.1053021266093538No Hit
CTTACCTGAGGAGACGGTGACCACAGACAGGCCACCCAGGGCTCAGGCTG5120.1053021266093538No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)