FastQCFastQC Report
Sat 3 Sep 2022
EGAF00001132511

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132511
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences370583
Sequences flagged as poor quality0
Sequence length300
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC30686982.807090449373No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC121483.2780780553884017No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCGAACC14350.3872276925816888No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGCACC13770.37157667782925824No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCGAACC13770.37157667782925824No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACT11010.29709943521424353No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAAAC10810.2917025335754743No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGATCC9900.26714663111907455No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCAAACC9190.24798763030144394No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTTGCCCCAGGGGTCGAACC8740.23584460161421328No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAAGC7270.1961773745692598No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGCGTCGAACC6950.1875423319472291No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAGGTCGAACC5490.14814494998421407No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGCCGAACC5480.1478751049022756No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACA5480.1478751049022756No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAGCC5450.14706556965646023No Hit
CTTACCTGAGGAGACGGTGACCACAGGAGACTGTGACAGTGACGGTGACC5120.13816068195249107No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGACCC4910.13249393523178343No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGCTCGAACC4890.1319542450679065No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT4620.12466842785556811No Hit
CTTACCTGAGGAGACGGTGACCAGGGTCCCCTGGCCCCAGGGGTCGAACC4280.1154936950696605No Hit
CTTACCTGAGGAGACGGTGCCCAGGGTTCCCTGGCCCCAGGGGTCGAACC4180.11279524425027593No Hit
CTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACCA4100.11063648359476824No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGACGTCCATAC3960.10685865244762982No Hit
CTTACCTGAGGAGACGGTGACCAGGGCTCCCTGGCCCCAGGGGTCGAACC3930.10604911720181442No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAACC3750.10119190572692217No Hit
CTTACCTGAGGAGACGGTGACCGGGGTTCCCTGGCCCCAGGGGTCGAACC3740.10092206064498371No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)