FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001132519

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132519
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3574551
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC3137428.777102354953112No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT979362.7398126366080664No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC805702.253989382162963No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG510971.4294662462502283No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT324380.9074706165893284No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC249830.6989129543822427No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG197970.5538317959374478No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC194590.5443760628957315No Hit
CTTCCCTTCTTCTCCTTTTCCCCTTTTTCCTTTTCCCCCTTCTTCCCTCT161550.45194487363587765No Hit
CTTCCCTTCTTCTCCTTTTCCCCTTTTTCCCTTTCCCCCTTCTTCCCTCT160910.4501544389770911No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACC153960.4307114376043313No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGACGTCCATAC149560.418402199325174No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAT110920.3103047068009381No Hit
CTTCCCTTCTTCTCCTTTTCCCCTTTTCCCTTTTCCCCCTTCTTCCCTCC103420.28932305064328356No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGA101120.28288867608826956No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCATAC100460.28104229034639594No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAC88800.2484228089066291No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACT87820.24568120583536227No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAG83550.23373564959627097No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATT82140.22979109823863192No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAT80390.22489537846851257No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATCC77130.21577535192531874No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGC72200.20198340994435382No Hit
CTTCCCTTCTTCTCCTTTTCCCCTTTTTCCCTTTCCCCCTTCTTCCCTCC68720.19224792148720216No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCGAACC64900.18156126461757016No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT59780.16723778734727804No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGC57820.1617545812047443No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCAATAC57710.1614468502477654No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAT57450.16071948616763335No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACG55830.15618744843757998No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAG54540.15257860357846342No Hit
CTTCCCTTCTTCTCCTTTTCCCCTTTTTCCTTTTCCCCCTTTTTCCCTCT54220.15168338624907016No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATC53380.14933344075941285No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAA51230.1433186993275519No Hit
CTTCCCTTCTTCTCCTTTTCCCCTTTTCCCTTTTCCCCCTTCTTCCCTCT50680.14178004454265725No Hit
CTTCCCTTCTTCTCCTTTTCCCCTTTTTCCCTTTCCCCCTTTTTCCCTCT46460.12997436601128365No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATGT45880.1283517846017584No Hit
CTTCCCTTCTTCTCCTTTTCCCCTTTTTCCTTTTCCCCCTTCTTCCCTTT44960.12577803477975275No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAC44890.12558220598894798No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCAAAC44050.12323226049929067No Hit
CTTCCCTTCTTCTCCTTTTCCCCTTTTTCCTTTTCCCCCTTCTTCCCTCC43550.12183348342211373No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGGT43100.12057458405265445No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATG43050.12043470634493675No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAAAC41440.11593064415642693No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGT41410.11584671753179632No Hit
CTTCCCTTCTTCTCCTTTTCCCTTTTTCCCTTTTCCCCCTCCTTCCCTCC41400.11581874199025277No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCCTGGCCCCAGACGTCCATAC40930.11450389153770642No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAACC39760.11123075317711231No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACGT37750.10560766932686091No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACT37410.10465650091438057No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCGAACC36750.10281011517250697No Hit
CTTACCTGAGGAGACGGTGACCATGGTTCCCTGGCCCCAGGGGTCGAACC36010.10073992509828508No Hit
CTTCCCTTCTTCTCCTTTTCCCCTTTTTCCCTTTCCCCCTTCTTCCCTTT35970.10062802293211093No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)