FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132596

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132596
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68
Sequences flagged as poor quality0
Sequence length208
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTATTTTTATAAATAGTAAGGATTGTGTTTTTTTGTATGGTGTTTTG811.76470588235294No Hit
GTTAAAATTTTGGGTTAAGGAGATCGACGCGTTGTCGTTTGTATTAAGAG68.823529411764707No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTG68.823529411764707No Hit
GTTAAAATTTTGGGTTAAGGAGATCGATGCGTTGTCGTTTGTATTAAGAG45.88235294117647No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGT34.411764705882353No Hit
ATTGTAGAAAGAGTTTGGGAGATTGAGGGGTGTAGAGTGGGGTTGGATTA34.411764705882353No Hit
GTTAAAATTTTGGGTTAAGGAGATCGACGTGTTGTCGTTTGTATTAAGAG22.941176470588235No Hit
TTTTTATTTTTATAAATAGTAAGGATTGCGTTTTTTCGTACGGCGTTTCG11.4705882352941175No Hit
ATTGTAGAAAGAGTTTGGGAGATTGGTGGATGAAAGGTTTTTTGTTTTGT11.4705882352941175No Hit
ATTGTAGAAAGAGTTTGGGAGGTAGAGGGTGAAGTGAGTTAAGATTATGT11.4705882352941175No Hit
GTTTGTAATTTTTTTTTTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGT11.4705882352941175No Hit
ATTGTAGAAAGAGTTTGGGAGGTTAAGGTTGTAGTGAGATTTGATTGAGT11.4705882352941175No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTCGGTGGATTGTGGGTGT11.4705882352941175No Hit
GTTTGTGATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGT11.4705882352941175No Hit
GGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTAATACCGCCGATTAATAAC11.4705882352941175No Hit
GTGGGTAATTGGAGCCAGTTGGGAGGATGAGGGTGGTGGATGGTGGGGGA11.4705882352941175No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATCGTGGGTGT11.4705882352941175No Hit
AGGGTTCCCTGGCCCCAGCAGTCAAACGGTGATATAACTCCCCGAACCAT11.4705882352941175No Hit
TTTTTATTTTTATAATAGTAAGGATTGTGTTTTTTTGTATGGTGTTTTGT11.4705882352941175No Hit
GTTGTAATTTTAGTTTTTCGGGAGGTTGAGGTCGGCGGATCGTGGGTGTT11.4705882352941175No Hit
ATTGTAGCAAGAGTTTGGGAGATTGAGGGGTGTAGCGTGGGGTTGGATTA11.4705882352941175No Hit
GTTTGTAATTTTAGTTTTTTTTTAGGTAATGTTGTATTTGTATTTGAGAT11.4705882352941175No Hit
AGGGTTCCCTGGCCCCAGTAATTTAAAGTACCAGCTGCTGCCCAACCTTC11.4705882352941175No Hit
GTTAAAATTTTGGGTTAAGGCGATTGATGTGTTGTTGTTTGTATTAAGAG11.4705882352941175No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGCTCCCACTATGCCC11.4705882352941175No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTAGGGATAACCACTCCAAAA11.4705882352941175No Hit
GTTAAAATTTTGGGTTAAGGAGATTGATGTGTTGTTGTTTGTATTAAGAG11.4705882352941175No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTAAGAACCAGTCAAAATATC11.4705882352941175No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTCGAGGTAGGTAGATTGTTTGAGG11.4705882352941175No Hit
ATTGTAGAAAGAGTTTGGGTTTGTGTTTAATTGTTTTTAAGATGGTTTTT11.4705882352941175No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGCGGGTAGAATTAGAAGTT11.4705882352941175No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGAGGTAATAACCACTACTATCATA11.4705882352941175No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGAGGAGGGTGGTTTGAGTT11.4705882352941175No Hit
ATTGTAGAAAGAGTTTGGGAGAGAGAGGGAGATTTAAGGTTTTTGTAGTA11.4705882352941175No Hit
ATTGTAGAAAGAGTTTGGGAATAGTTAAGGGATAAAAGTTGTGATGATGG11.4705882352941175No Hit
GTTTGTAATTTTAGTTTTTCGGGAGGTTGAGGTCGGTGGATCGCGGGTGT11.4705882352941175No Hit
GTTAAAAGTTTGGGTCAAGGAGATTGATGCGTTGTTGTTTGTATTAAGAG11.4705882352941175No Hit
GTTAAAATTTTGGGTTAAGGGTTATTTTTTGAATTTTTATTTTGATCGGA11.4705882352941175No Hit
ATTGTAGAAAGAGTTTGGGCGGAAGAAAATTTTCGGTGATTTTTTCGTTT11.4705882352941175No Hit
GTTAAAATTTTGGGTTAAGTTATTAGATTTTATTGATTTCGGTTATTTTT11.4705882352941175No Hit
ATTGTAGAAAGAGTTTGGGAGGTTAGGGTTGTAGTGAGATTTGATTGAGT11.4705882352941175No Hit
GTTTGTAATTTTAGTTTTTTGAGAGGTTGAGGCGGGAGGTGGAGTTTGTA11.4705882352941175No Hit
ATGTTGGTTTCATGGTTTGGTCTAACTTTACCGCTACTAAATGCCGCGGA11.4705882352941175No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)