FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132597

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132597
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63
Sequences flagged as poor quality0
Sequence length208
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTCAGAATACCAGCTCGAACT11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTACCTTAAGTATCGTAATACGCAGTCTTTGTG11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGAAGTCAAAGCAGGAATAAACAGCCAAAAAATC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCCCCTTTCATAGTACTCTAAGAGGAGCG11.5873015873015872No Hit
ACAGGAGACTGTGACAGTGACGGTGACCACAGACAGGCCACCCAGGGCTC11.5873015873015872No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCGTTCGCGCCCGCCATAGT11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTACTACTCTAACACACC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTGCCTGGCCCCCCCTGCCCG11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCATAGCAGCAGATACGTGTCTAACAATC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCAAGAAGGAGCTAATACA11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACAATATGTGACGGACGGC11.5873015873015872No Hit
ATGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTCGTAGTCCCCGAA11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAACCTACCCAACCACAGCTATACTT11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTATGGTCATGGTGATGCTAT11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGACCAACTC11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTTGGGGGA11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTTGTCAAAAGAGTACCTATCATAAGCACCGTC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAAGCAAGAGATAGCAGAGGGCACTAC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTACC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTCTCCAGCCACTGCTATACT11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGCTAAACCATTGAACTAC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGACGTCCCAATAGCAGCTGGA11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGAGTACCTAGCAAACCGGCATAT11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGAAATCAAAAGTAGGAGACAATGAATATGTGGT11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCACGCCCGCGGAAAAACCACGACTATCA11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAAAGATG11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTTGTCCGGAGC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACCGACCCTTCCCTCTCTC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGCCTATCATGGCAAATCC11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATGAGG11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTATTAGTCCTGGGGGGCGAAGTT11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCCCAGTAGTAGCAGTTAGTAGA11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACAAGGGGATGCAGCTGGGACTTAT11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAATCCCAGATACCCGCTCT11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTTACCCTA11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAATCCCGGCCCTTGTTTCGTCCACGT11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGGGTCGTGCCCG11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCGAAGCATAGAAGTGGAGCACGTACCAA11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGTGAGGGAACCTAGGAACTC11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGAGGCTAGCTCGGTAAAC11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTATTGAGTTAC11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTTCTCAGTACCCCA11.5873015873015872No Hit
GTGGTCCCTTTGCCCCAGACGTCCATACCGTAGTAGTAGTACCAGCTGGT11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGGGTAACAGTCACTGCCACAATG11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTATTCCCCGCCGGT11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTACA11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCGGTAGCTGGCAGCTGGACCAAA11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGCATGCGTACGT11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGACTCCTTT11.5873015873015872No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGCGAGTAGATTATTTGAGG11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTTGGCACCGGA11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCACCCAAGTAGTTCCCACTATACTGGCC11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGGAGCTTGTGAC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGCCAGGAAGCCATAGCTGTACCAAAAATTC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCATGAATCGTTTTTTGTTACTTCCCGCT11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGGAGTGATA11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGCCACTCCTCGCCCCCATCGT11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCAAGCGG11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGAAACCAGC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCGAAGTAGTAGTCATGAGAAACTCGTCG11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTTGAGCCCGAGAGC11.5873015873015872No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGGAATCACC11.5873015873015872No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTATGCAACATAACTCCTACCCCC11.5873015873015872No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)