FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132601
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69
Sequences flagged as poor quality0
Sequence length208
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTG34.3478260869565215No Hit
ATTGTAGAAAGAGTTTGGGAGGTTAAGGTTGTAGTGAGATTTGATTGAGT22.898550724637681No Hit
AGGGTGCCCTGGCCCCAGTGCTGGGAGTATTCATGTTTCGGCGGAATCAG11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAATCAACCCCACTATTCCCACGCAAAGTCGC11.4492753623188406No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGT11.4492753623188406No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCGAGGGT11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGCTAAACCAGTCAAAATATCC11.4492753623188406No Hit
GTGGTCCCTTGGCCCCAGACGTCGAAACCGTAGTAGTAGGAATAAGGATT11.4492753623188406No Hit
TTTTTATTTTTATAAATAGTAAGGATTGTGTTTTTTTGTATGGTGTTTTG11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTAGCAGCTGGTACTACTACA11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGCAGATGGTACTACTACA11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTCCA11.4492753623188406No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGAAGAAGTAGGAGTA11.4492753623188406No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCAACATAGACGGGCACGCGTGT11.4492753623188406No Hit
AGGGCTCCCTGGCCCCAGGGGTCAACGGAGTCACATTCTGGGAGGCCCCA11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACGGTTAACCACCATCCATCTCTCA11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGCCGAGCCACCGAGGGCCATGGGAAAAAGC11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAAGCAGTAAGTAGTAGCCCTAATATC11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCACAGCACCCCCCTACGTTGGAACTGTA11.4492753623188406No Hit
GTTTGTAATTTTAGTTTTTTGGGGAGGTCGAGGCGAGTGGATTGTTTGAG11.4492753623188406No Hit
GTTAAAATTTTGGGTTAAGGAGATCGATGCGTTGTTGTTTGTATTAAGAG11.4492753623188406No Hit
GTTAAAATTTTGGGTTAAGGAGATTGACGCGTTGTTGTTTGTATTAAGAG11.4492753623188406No Hit
ATTGTAGAAAGAGTTTGGGAGATTTGAGGTAGTGGTTTTTTAGGGATTGT11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCACCAGATGGTACTACTACA11.4492753623188406No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTACTTATAACCACTGTATGT11.4492753623188406No Hit
GGTTTTTGAGGAATTGGATTCTGAGTTTGTTTGTAAGGTGAGATGATTTG11.4492753623188406No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTTATATAAACTCCC11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGAAGTAGCAGTCGGAGTTTACAGT11.4492753623188406No Hit
ATTGTAGAAAGAGTTTGGGAGTATTTTTTTTTTTTTATTTTTTGGAATAG11.4492753623188406No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTATATGCT11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACGAGATAATAAGCACTCCAAAATT11.4492753623188406No Hit
GTTAAAATTTTGGGTTAAGGAGATTGATGCGTTGTTGTTTGTATTAAGAG11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGACAGAGAGGAGCTCCGCCGCGACC11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAATCCCGTCGATCGCACAGCCGTCTAC11.4492753623188406No Hit
GTGGTCCCTTGGCCCCAGACGTCCCTCCCTACCGGGAGGTAGTAATAACC11.4492753623188406No Hit
GTTAAAATTTTGGGTTAAGGAGATCGACGCGTTGTCGTTTGTATTAAGAG11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAAACACCCAATGTTATCTTTCGTACA11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCTAACTAGCCGTCAAAAGCACTACCAGA11.4492753623188406No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGCCCCTAGTAGTTAC11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAC11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAACCCCGCAGACGTTGTAGCAACGTCA11.4492753623188406No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTCG11.4492753623188406No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTTATAGGCTACGAC11.4492753623188406No Hit
AATGGTAATAAGACGACCAATCTGACCAGCAAGGAAGCCAAGATGGGAAA11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAACACTTAGTCACCGTAATACTACT11.4492753623188406No Hit
ATTGTAGAAAGAGTTTGGGAGTTTAGGTAGTAGTGAGATATGATTGCGTT11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGCCCCACACCGAGAACCACAAGA11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAAACCCCCCAAGAAGGGCCCCATAGA11.4492753623188406No Hit
ATGTAGAAAGAGTTTGGGAGTTCGAGGTTATAGTGAGTTATTGTATTTTA11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGAAGTACGAGCCAGGTATACC11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTACA11.4492753623188406No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGACGTTAGGATA11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAAATAGCCCATGATGTACCCGAGAGA11.4492753623188406No Hit
GTTAAAATTTTGGGTTAAGGAGAGTTAGTTGGGGTGGGTGTAGGGTTATT11.4492753623188406No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTCGAGGTGGGTGGATTAGTTGAGG11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGGCAAGGCAGTCAGACCCGCCGT11.4492753623188406No Hit
GTTAAAATTTTGGGTTAAGGAGATTGATGTGTTGTTGTTTGTATTAAGAG11.4492753623188406No Hit
GTTAAAATTTTGGGTTATTTTTTGAATTTTTATTTTGATCGGAAGAGCGG11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACTCCGTACAGGCTACAACAAA11.4492753623188406No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCAACGATAACTCCCCGAACCAT11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGCCATGGAATAGCAGATGGCAATACGAAAA11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGGCCGACGACACGCCAACGAGCAGATACGA11.4492753623188406No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGAGGTCGTGACCAAGGGT11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGTACCAGCTGCTGCTATAGGCGA11.4492753623188406No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGGCAGCCACTGCCAATCCCCTCTCGC11.4492753623188406No Hit
ATTGTAGAAAGAGTTTGGGAGATAGAGTAAGATTTTATTTTAAAAAAAAA11.4492753623188406No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)