FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132605

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132605
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1477
Sequences flagged as poor quality0
Sequence length208
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGGAGACTGTGACAGTGACGGTGACCACAGACAGGCCACCCAGGGCTC281.8957345971563981No Hit
TCCCCAGTCAGGGTGAGTAGTGGTGGGGAGCCGGGCAGGGGCCCAGCCCT70.47393364928909953No Hit
CCATCATAGCCCTGCTGACCCTGTGACCTTGTGGCAGCCCCTCTGGCCCC40.2708192281651997No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAAAACGAGGGATAACCACTACT40.2708192281651997No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGGAACCCAATTGTAGCCATCTCTACC40.2708192281651997No Hit
ACAGACAGGCCACCCAGGGCTCGGGCTGGGTATGGTGGGCTCTGGTGGGA40.2708192281651997No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGCCAGCTGCTGCTATCCCCCG30.2031144211238998No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTTATAGATGTAATAACCAGT30.2031144211238998No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGCCACAAGTAGC30.2031144211238998No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGCCCCTCCG30.2031144211238998No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCCTATCCCCAGACATAACCACT30.2031144211238998No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTTCAGCCCGTA30.2031144211238998No Hit
AATATTCCCTGGCCCCAGTAGTCAAAATTGTCACAGGTGCCACCGTAACA30.2031144211238998No Hit
AGGGTTCCCTGGCCCCAGGTCCAGCCACTGCTACGGGACCCATCTCTCGC30.2031144211238998No Hit
AGGGTTCCCTGGCCCCAGTAGCCCGACGAGTACCAGCCACTGCTACCCGC30.2031144211238998No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAAGGGGGGGG30.2031144211238998No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCATGAAGGCTACTATCATA30.2031144211238998No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAACCCTC30.2031144211238998No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTCGAACCGGAAGACGAG30.2031144211238998No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGCTGACCCGTACAAGTTAATGCTATA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGCCTGACATAGCAGCTGGTACTAC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGCTCTTATCGGTGAAGCTCTCGCACA20.13540961408259986No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGTATCGGAAGAGCTGCTATACTC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAAGGCCCTGCCCCACGACCCCGTTC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTCCGTACC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTCAGGGGACTCCTGCTTCCC20.13540961408259986No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTATTCTGACCCGCTCCC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGATGCCCACTAC20.13540961408259986No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCAAGGGCTGTGGGATAACCACT20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTGACGACGGTACCAGCCACT20.13540961408259986No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCCCCAGTAGCTCCCACTATTGT20.13540961408259986No Hit
ACGGTCCCCTGGCCCCAGTAGTCAAACCTAGGATCCCCAGTTATCCTCAC20.13540961408259986No Hit
CACACCAAGCTCAGAGAGGGCAGGGGTGGGAAGGAGACATCAGATGTGGG20.13540961408259986No Hit
AGGGTTCCCCACAGCGCTACCTACGCGACGAGCCTGCCGTAATCGTACTC20.13540961408259986No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGTAAAGTCA20.13540961408259986No Hit
TGGGTTCCGTGGCCCCAGGGGTCGAACCAGACAGAAGTGTAAAGCCCGCA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGCCCCAGTACCAGCCACTGCTATC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTCACTACTATCATAGTAACGTTC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGGAGAAGTA20.13540961408259986No Hit
GTGGTCCCTTTGCCCCAGACGTCCATACCGTAGTAGTAGTACCTAATAGC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGGGTAGCATAGCTGTATC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAATCCCAACC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCAAGCCCCCCAGAAGATCATAGTCACT20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAATGGCCCGTAGCCTCAACCCCTCT20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTGGGGATCCCCGAACCA20.13540961408259986No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATACGAATAACCAGTCAAAAT20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTATTCGCCCAA20.13540961408259986No Hit
GTGGTCCCTTGCCCCCAGACGTCCAAACCGAAGTAGGCGCCGTCCCAGTT20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTCCCCCGAGCCACTCCAAAAATC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGGGGACTGTAACCATAGCTGT20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGGAGGGGTTAAT20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAATCTCTCTCGGGTAGCAGCTACCACC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTACCAGCTGCTGCTATA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTTGGCAAGGTCACCGTAGGGGGACTCTCTGGC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCATGTTCAGAAACGATAACTCCCCCAAA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTACTTCCCCACTGTAGTCTCGGCCCCTCTCGC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAAAGGATAGC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTATAACCCCGACAGGACTCG20.13540961408259986No Hit
AGTGTTCCCTGGCCCCAAGAGTCAAAATGGTAGGGAATTGTACCCACTAT20.13540961408259986No Hit
CAGCGGTACGTCCCGCTCACTAAGAGGTGGCGGTGTCCGAGGCCTTCAGG20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGACGTAGTTCCAGTTAGTGCGTGG20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTGCAGACCGTAATAGTAATAGGATCCGAA20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTATTGGGGACGAGCTGCTAT20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGGAGCTGTCCGA20.13540961408259986No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCCTCCCCGGTAACCACTCCAAA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGCCATGGGGCGAGCTGCTATACTC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGATCATAGGGCA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCGAGGAAATAACCACTACTATCCCGATC20.13540961408259986No Hit
GTGGTCCCTTTGCCCCAGACGTCCATACCGTTCCATCCGACCTCTCTGGC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCGTGGATAACTCCCCGAACC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGCCCGACGAGCT20.13540961408259986No Hit
ATGCAGACACCACACGCTCTCCTGCAGTAACTCCTTTCATCTTCACGGTG20.13540961408259986No Hit
TTGTGGCAGCCCCTCTGGCCCCTTGGCCCCGTCCTGTTACCTCTCCTCGT20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTGCCACGAGCTGTC20.13540961408259986No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCAAAGTACCAGCCACTGCTTCG20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAAGGGCATACACCACC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAATTCCCAATTCAAGTAGGAGCTCCCA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTCCCGGCCGTCGTGTCGGC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTCGAATTAATAACCACTAC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTTGCACAGGGTAGCAGCTACCAC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGGTGGCCAGCTGCTGAGG20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGACACCATTGTAGCC20.13540961408259986No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCACCACCACTACCATCATAGGG20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGCCCTCATC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAAGTGGC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAAGACCAGCCACTGCTCGGACGTAG20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTTGGGACGAGCTGC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTCATTAGC20.13540961408259986No Hit
GAGGTCCCCTGGCCCCAGATGTCCATACCATAGTAGAAGTGGTTATTGTC20.13540961408259986No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCGAGGTAACCACTACTATC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTAGCTCCCACCCCCCATCTCGCACAGTAA20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATGGGC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGCCCGAACATAGCAGCTGGTA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGGATAGCTGTATCCACGTAAGAGGAG20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGGGATAATAACC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAATAGTCAAAGCCCTCCCTCCCGCGCACACAGTA20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTATACCAGCTGCTGCCGGCT20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATTGAG20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTAACCTGCTATAGATACCCT20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTACCAGCCACTGCTATACCCGGT20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAACGAAGTAGCTCCCACTATGCCCCAC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCGCAGCTACCACCACTACCCGTTGGGGA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGTTCTCGGGACCCGGTTACTCTCGC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAAGGAGTAGC20.13540961408259986No Hit
GTGGTCCCTTTGCCCCAGAAGTCCATACCGTGGAAGTAATAGTCGTGGCC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATTATCTTATCGCTATAACCAGTCAA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGGCCCCAGCCACCCGATAAACAG20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCAGACCGTAGTAGTAGTAGTGCCAGCC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATGTCGTAGTGGGCGTCACCGTAGAA20.13540961408259986No Hit
ATTGTCCCTTGGCCCCAGATATCACCCGAAGCATAGTAATACGGCCTCGC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTACGGGGAGCT20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATAGTA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACTTATAACTCCCCGAACCATAGTA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTCGGGCTTAACCATAGCTGCCCT20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAAGTGTC20.13540961408259986No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCGCACCAATAATAACTCCCCGA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGCAGTCAAAGTTTTTGCCCAGCCACTGTCCTAA20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAACGGGG20.13540961408259986No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGACAATCAT20.13540961408259986No Hit
GTTGTCCCTTGGCCCCAGACGTCCATACCGTAGCCGCGGCAGGTGGTACT20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAATCCCGGTTTAAGTTTACCACCGC20.13540961408259986No Hit
ATTGTCCCTTGGCCCCAGATATCAAAGGCATCCGCAGGGCCTACTGTCGC20.13540961408259986No Hit
AGAGTTCCGTGGCCCCAGTATTCAAAAAAGTAGTAACCGGAGTCATCGGA20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGCTGCTATATATAGGGTCGGTGGAACTGAAAGC20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTACGGTCGGAG20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGCGTCGGGCCCCGCTCGGTAGCAG20.13540961408259986No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTTGTACCAGCTGCTGCG20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGAGCTCCCACTTGTGTTCTCGCACA20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGGAGAGCGT20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACTTTGCACCGTAGCGACCGGCTCT20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTACTAGTATCGTGCGAT20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTTATCCCCCCGGTTACTACCGAGGCCTCT20.13540961408259986No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTCAGCTGCTGCTAT20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTACCGAAACCATAGCTGTCCGCCCTCTCTCGC20.13540961408259986No Hit
AGGGTTCCCTGGCCCCAGTAGTCTATGAATTCTAGGGATACCTTTTGTCC20.13540961408259986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)