FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132606

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132606
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44
Sequences flagged as poor quality0
Sequence length208
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGT24.545454545454546No Hit
GTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGTTT12.272727272727273No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCAGCCCCGTTAAAGCTACCA12.272727272727273No Hit
GGTTTTTGAGGAAGTGGATTTTGAGGTTGTTTGGAAGGGGAGATGTTTTG12.272727272727273No Hit
AGGGTTCCCTGGCCCCAGGAGTCAAAGCAGGCAAACGACGAAGAATAAGA12.272727272727273No Hit
ATTGTAGAAAGAGTTTGGGAGGTTGGAGTTGTAGTAAGTTGTGATGGTAT12.272727272727273No Hit
AGGGCTCCCTGGCCCCAGTAGTCTGGGGTATAATCGTTCCATTAAGACTC12.272727272727273No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTCAGTCACCACCCCTACAAGACC12.272727272727273No Hit
ATTGTAGAAAGAGTTTGGGAGAGTTAGGGAAGATTTAGGATGAGAGAGAG12.272727272727273No Hit
ATTGTAGAAAGAGTTTGGGAGGTTAAGGTTGTAGTGAGATTTGATTGAGT12.272727272727273No Hit
AGGGTTCCCTGGCCCCAGTAGTCATTTAGCTGCCATCTGGCACTATTATA12.272727272727273No Hit
GTTTGTAATTTTAGTTTTTTGGGAAGTCGAGGTAGGAGGATTATTTGAGG12.272727272727273No Hit
TTTTTATTTTTATAAATAGTAAGGATTGTGTTTTTTTGTATGGTGTTTTG12.272727272727273No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGGCGGAAAGGCAATGAAT12.272727272727273No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGGTGTTTTG12.272727272727273No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTGCGTAACACCCGG12.272727272727273No Hit
ATTGTAGAAAGAGTTTGGGAGATTGAGGGGTGTAGAGTGGGGTTGGATTA12.272727272727273No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTAGTACA12.272727272727273No Hit
AGGGTTCCCTGGCCCCAGTGGTCGAAGTACCTTTCTGAAGCTTCGGCTCT12.272727272727273No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCACTCGATCAAAATATCATT12.272727272727273No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAAACACCCAACGGTCGCTCTATTAAC12.272727272727273No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAATCGAACGCCCAATAATAACCAGTC12.272727272727273No Hit
GTTAAAATTTTGGGTTAAGGAGATTGATGTGTTGTCGTTTGTATTAAGAG12.272727272727273No Hit
ATTGTAGAAAGAGTTTGGGAGATTGAGGGGCGTAGAGTGGGGTTGGATTA12.272727272727273No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTG12.272727272727273No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTCTGCATAGTT12.272727272727273No Hit
GTTAAAATTTTGGGTTAAGGAGATTGATGTGTTGTTGTTTGTATTAAGAG12.272727272727273No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGGGATAACA12.272727272727273No Hit
GTTTGTAATTTTAGTTTTTTAGGAGGTTGAGATAGGAGAATCGTTTGAAT12.272727272727273No Hit
ATTGTAGAAAGAGTTTGGGTGGTAAAGGTTGTAGTGAGTCGTGGTCGCGT12.272727272727273No Hit
GTTAAAATTTTGGGTTAAGGAGATCGATGCGTTGTTGTTTGTATTAAGAG12.272727272727273No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGATTTAGCGGCTGTTATACC12.272727272727273No Hit
ATTGTAGAAAGAGTTTGGGAGAAGAGAGGGTTTTTTTTGAAAGTGATTGG12.272727272727273No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGAGGAGGGTGGTTTGAGTT12.272727272727273No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGGAGCAAAATCC12.272727272727273No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAATGGTAATAGTTCCGAGT12.272727272727273No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTAAGGTGGGTGGATTATAAAGTT12.272727272727273No Hit
GTTTGTAATTTTAGTTTTTTAGGAGGTTGAGGTAGGAGGATTGTTTGAGT12.272727272727273No Hit
ATTGTAGAAAGAGTTTGGGAGATAGAGTTAGATTTCGTTTTAAGAAAGAA12.272727272727273No Hit
ATTGTAGAAAGAGTTTGGTAGTGGGGTGGTTGTAGGAGTGGTTTGATGAA12.272727272727273No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTACTTTTAGCTACGATT12.272727272727273No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGCGGAGGTAGGCGGATTATTTGAAG12.272727272727273No Hit
GGTTTTTGAGGAAGTGGATTTTGAGTTTGGTTGTAAGGTGAGATGTTTTG12.272727272727273No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)