FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001132612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences733103
Sequences flagged as poor quality0
Sequence length208
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGGAGACTGTGACAGTGACGGTGACCACAGACAGGCCACCCAGGGCTC168112.2931293419887795No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGGGATAGTGGAG82181.1209884559195638No Hit
ACAGACAGGCCACCCAGGGCTCGGGCTGGGTATGGTGGGCTCTGGTGGGA41830.5705883075093131No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTAGCAGCTGGTACTACTACA35070.47837752675954126No Hit
CACACCAAGCTCAGAGAGGGCAGGGGTGGGAAGGAGACATCAGATGTGGG26070.35561169440037754No Hit
CCATCATAGCCCTGCTGACCCTGTGACCTTGTGGCAGCCCCTCTGGCCCC17150.2339371138844064No Hit
ACAGACAGGCCACCCAGGGCTCAGGCTGGGTATGGTGGGCTCTGGTGGGA10640.14513649514461133No Hit
CTTCTGCGGGGCTCTGGACAAGCAGCAGCAGGCAGGGGAGGAGGCGGAGC8170.11144409448604084No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)