FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132672

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132672
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125
Sequences flagged as poor quality0
Sequence length151
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC1915.2No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC129.6No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT43.2No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC32.4No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATG32.4No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT32.4No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC21.6No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG21.6No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT21.6No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG21.6No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG21.6No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACT21.6No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGATCCCTGGCCCCAGTAGTCCACTT10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGATTCCATGGCCCCAGTCGTCAAAGC10.8No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGTCATTTCTCC10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCCCGG10.8No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATGTCAAAAC10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCAAAGT10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGTCCGAACT10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC10.8No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGGCGTCGATCC10.8No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGACAATAA10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGA10.8No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCATAC10.8No Hit
CTTACCTGAGGAGACGGTGACCATGGTTCCCTGGCCCCAGTAGCCGAAAG10.8No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGC10.8No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC10.8No Hit
CTTACCTGAGGAAACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCTGCAGCATTCTAACC10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCTGTA10.8No Hit
CTTACCTGAGGAGACGGTGACCAGTGTTCCCTGGCCCCAGGTATCAAAAC10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAC10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCAGCTT10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAAGT10.8No Hit
CTTACCTGAGGAGACGGTGACCGTGGTTCCTTGGCCCCAGACGTCCATCC10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAG10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGGCGAACC10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGTCCCCTGGCCCCAGGCGTCGATCC10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGCTCCCTGGCCCCAGGAGTCAAAGT10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATCC10.8No Hit
CTTANCTAAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGATTCCATGACCCCAGTAGTCTCCCA10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATTGG10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCACGGCCCCAGAAAGCAGAGT10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGATCCCTGGCCCCAGGGGTCGAACC10.8No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGACGTCCATAC10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCCAATAACCACTC10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTTTGTAGCCATCTCTACAG10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATTA10.8No Hit
CTTACCTGAGGATACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGA10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCACCG10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCCAAG10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGAGATAGC10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGACCCAGAAAT10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCATAAC10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCTGGGGTCGAATC10.8No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAA10.8No Hit
CTTACCTGAGGAGACGGTGACCACAGGAGACTGTGACCGTGGCGGTGACT10.8No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAA10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGA10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAAAT10.8No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAT10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCGATT10.8No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTGGGCCCCAGACGTCCATAA10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTCGTCAAAGC10.8No Hit
CTTACCTGAGGAGACGGTGACCAAGGTTCCCTGGCCCCAGGAGTCCTCGG10.8No Hit
CTTACCTGAGGAGACGGTGACCGGGGTTCCCTGGCCCCAGACGTCCATAC10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACAAC10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGT10.8No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGGA10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCATGGCCCCAGTTGTCGTGCG10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACC10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCTACCA10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGAAT10.8No Hit
CTTACCTGAGGAGACGATGACCGTGGTCCCTTGGCCCCAGACGTCCATAC10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCCGGCCCCAGGGGTCGAACT10.8No Hit
CTTACCTGAGGTGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC10.8No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGTA10.8No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACCT10.8No Hit

[OK]Adapter Content

Adapter graph