FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132673

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132673
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences187
Sequences flagged as poor quality0
Sequence length151
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC2010.695187165775401No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC126.417112299465241No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC126.417112299465241No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT94.81283422459893No Hit
CTTCCCTGGGGGCTGACGGATCCAAGATCGGAAGAGCACACGTCTGAACT94.81283422459893Illumina Multiplexing PCR Primer 2.01 (100% over 26bp)
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT73.7433155080213902No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC42.13903743315508No Hit
CTTCNCTGGGGGCTGACGGATCCAAGATCGGAAGAGCACACGTCTGAACT31.6042780748663104Illumina Multiplexing PCR Primer 2.01 (100% over 26bp)
CTTACCTGGGGGCTGACGGATCCAAGATCGGAAGAGCACACGTCTGAACT31.6042780748663104Illumina Multiplexing PCR Primer 2.01 (100% over 26bp)
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACC31.6042780748663104No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT21.06951871657754No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT21.06951871657754No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG21.06951871657754No Hit
CTTACCTGAGGAGACGGCGGACCAGATCGGAAGAGCACACGTCTGAACTC21.06951871657754Illumina Multiplexing PCR Primer 2.01 (100% over 27bp)
CTTANCTGAGGAGACGGTGACCAGGGTACCGTGCTCTCAGGGGTCGAAAA10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCCGGGATCCCTGGCCCCAGTAACCCAAGG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCTCCCCAGTCAGGGTGAGTAGTGCTGGTG10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATTC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATT10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCTGTTT10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCATTGTTCCCTGGCCCCAGATATCAAAAG10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCGGGGTTCCCTGGCCCCAGGAGTCGAATA10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTTGCCCCAGGCGTCCAACT10.53475935828877No Hit
ATTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC10.53475935828877No Hit
CTTCCCTGGGGCGACGGATCCAAGATCGGAAGAGCACACGTCTGAACTCC10.53475935828877Illumina Multiplexing PCR Primer 2.01 (100% over 28bp)
CTTACCTGAGGAGACGGTGACCGTGATCCCTTGGCCCCAGGGGTCCATAC10.53475935828877No Hit
CTACNTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGTA10.53475935828877No Hit
CTTACCTGAGGAGACGGTAACCAGGGTTCCCTGGCCCCAGTAGTCAGTGT10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGGGA10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTTGCCCCAGACGTCCAAGA10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTCGAGATAAC10.53475935828877No Hit
CTTACCTGAGGAGACGATGACCAGGGTTCCCTGGCCCCAGATATCGAACC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTAGTCGGCGG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGCGTTCCCTGGCCCCAGGGGTCGAACC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCACAC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGCGTCGAACC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGGTCGAAGC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCTCCAGACGTCCATAC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATTA10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGTAGT10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGGCGACAA10.53475935828877No Hit
CTTACCTGAGGAGACGGATCCAAGATCGGAAGAGCACACGTCTGAACTCC10.53475935828877Illumina Multiplexing PCR Primer 2.01 (100% over 28bp)
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTGAAAGG10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCGTGGCCCCAGACGTCCATAT10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCGCAGTAGTCAAAGT10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATTT10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCATTGTTCCCTGGCCCCAGATATCAAACG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCACGGTCCCCTTGCCCCAGTAGTCAAAGT10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTCCCACGGCCCCAGAAGTCGCTGT10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAATAAGAGT10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCTGGGTTCCCTGGCCCCAGTCGTCAACCC10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACCA10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGACGTCCGTAC10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGTG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATCCC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGATATCGACAG10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCCTGGCCCCAGATATCAAAAG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAAGTCAATTT10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTCGTACATAA10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCAAAGG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTCCCCTGGCTCCACAAACTATGTT10.53475935828877No Hit
CTTACCTGGGGGCTGGCGGATCCAAGATCGGAAGAGCAAACGTCTGAACT10.53475935828877Illumina Multiplexing PCR Primer 2.01 (96% over 26bp)
CTTANCTGAGGAGACGGTGACCAGGGTAGCCTGGCCGCAGAGGTCATGGA10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTCCCCAAAGC10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGC10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTCAAACCTTAGTAATAACC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCGAGAAGTAAATAAATGGGCGAGAGGTGG10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCAAATC10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCTTCCTATCCTCTTTCTTTCCTCTTCCTT10.53475935828877No Hit
CTTANCTGAGGGACTGCCTGATCCAAGATCGGAAGAGCACACGTCTGAAC10.53475935828877Illumina Multiplexing PCR Primer 2.01 (100% over 25bp)
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCACAATTCCCCCG10.53475935828877No Hit
AGTCCCTTCTTCTCCTTTTCCCCTTTTCCCTTTTCCCCCTCTCTCCAAAG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAC10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAA10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAA10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCAAACC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCGGGCCCCAGGGTTCGAAAG10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAT10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCCTGT10.53475935828877No Hit
CTTACCTGGGGACTGCCTGATCCAAGATCGGAAGAGCACACGTCTGAACT10.53475935828877Illumina Multiplexing PCR Primer 2.01 (100% over 26bp)
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCACACGTCCACCC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGGCGTCGATAC10.53475935828877No Hit
CTTACCTGAGGAGACGGTAACCATTGTCCCTTGGCCCCACATATGAAAAC10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGATCC10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCACAGGAGACTGTGACAGTGACGGTGACC10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCCTGGCCCCAGATGTCAAAGG10.53475935828877No Hit
CTTANCTGAGGAGCCTGGCGGACCAGATCGGAAGAGCACACGTCTGAACT10.53475935828877Illumina Multiplexing PCR Primer 2.01 (100% over 26bp)
CTTACCTGAGGAGACGGTGACCAGGGCTCCCTGGCCCCACCGGTCAAAAA10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCAAAGT10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGGTATCAAGAG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGTCCC10.53475935828877No Hit
CTTTCCTGGGGGCTGACGGATCCAAGATCGGAAGAGCACACGTCTGAACT10.53475935828877Illumina Multiplexing PCR Primer 2.01 (100% over 26bp)
CTTACCTGAGGAGACGGTGACCCGGGTTCCCTGGCCCCAGACGTCAAACC10.53475935828877No Hit
CTTCCCTGGGGTGACGGATCCAAGATCGGAAGAGCACACGTCTGAACTCC10.53475935828877Illumina Multiplexing PCR Primer 2.01 (100% over 28bp)
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCTCCCCAATATCGCCT10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCCGGGTTCCCTGGCCCCAGAAGTCAAAGT10.53475935828877No Hit
CTTCNCTGGGGCTGACGGATCCAAGATCGGAAGAGCACACGTCTGAACTC10.53475935828877Illumina Multiplexing PCR Primer 2.01 (100% over 27bp)
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACG10.53475935828877No Hit
CTTANCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGT10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCGCCCTGGGGTGAAAGCAGATTTGCATCA10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGGG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCACAGACAGGCCACCCAGGGCTCGGGCTG10.53475935828877No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACT10.53475935828877No Hit

[FAIL]Adapter Content

Adapter graph