FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132675

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132675
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences185
Sequences flagged as poor quality0
Sequence length151
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC158.108108108108109No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC147.567567567567568No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC137.027027027027027No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG63.2432432432432434No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT63.2432432432432434No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT52.7027027027027026No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT52.7027027027027026No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC31.6216216216216217No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG31.6216216216216217No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC21.0810810810810811No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACG21.0810810810810811No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT21.0810810810810811No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG21.0810810810810811No Hit
CTTACCTGAGGAGACGGTGACCACAGGAGACTGTGACAGTGACGGTGACC21.0810810810810811No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTAAAGGAGT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCATGGCCCCAGACGTCCATAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATACT10.5405405405405406No Hit
CTTACCTGAGGAGACGGGTGACCAGGATTCCCTGGCCCCAGGGGTCGAAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGATTC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAAAAGTCCCCCA10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAGGC10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGA10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGACGTAGC10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCACTGGTCCACTC10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGCCCATTGTCCCTTGGCCCCAGATATCAAAAG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCCCAT10.5405405405405406No Hit
ATTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGCTTCCCTGGCCCCAGTAGTCAAAGA10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCACAGGTGGAGAACACTGACAGCATCCTT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAACGC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCGTGGCCCCTTTGCCCCAGACGTCTATGT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAGGTGGGGGC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTCGTCAAAAG10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGCCGGAACAA10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCATAT10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCATTGCCCCTTGGCCCCAGACGTCCAGTG10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCCCCT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCCAACC10.5405405405405406No Hit
TTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATA10.5405405405405406No Hit
CTTACCTGGGGGCTGACGGATCCAAGATCGGAAGAGTACACGTCTGAACT10.5405405405405406Illumina Multiplexing PCR Primer 2.01 (96% over 26bp)
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAT10.5405405405405406No Hit
CTGAAAGGAGGAGACGGGGAAAGGGGGGAAGGGGAGGAAGAAGGGAAAAA10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCACCGCTGCTTGCAGT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCATCC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGA10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACCC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGCCCG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCGAGCCGGCCGCTG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTTGTCAAAGC10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGGCCATAT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATAGG10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCCAACT10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTACCCTAGTA10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACTG10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGTG10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCGTGGTTCCCTGGCCCCAGACGTCCATAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGCGGTACCAG10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAAGTCAAAGC10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCCAGGG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCAAAG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCTAGAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCTAGGG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGCCCAGGGTTCCCTGGCCCCAGGGGTCGAACC10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCATAGG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCGTTGCCCCAGACGTCGATTC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGACACCTG10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGAGAACAGACGTACTTAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCGCGGTCCCTTGGCCCCAGACGTCCATAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTATTCAGGAT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGAGC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAA10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGCTATAAGGCG10.5405405405405406No Hit
CTTACCTGAGGAGACGGTACCGTGGTCCCTTTGCCCCAGACGTCCATACC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGACACCGC10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAT10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATGG10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGTAGTCAAAAT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATGA10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGCTC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTTAGGGA10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCACAGGAGACTGTGACCGTGACGGTGACC10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGCCCATAC10.5405405405405406No Hit
GAAGACGGCCATTAGCTGTACCATACTCAGGCACACAAAAATACTGATAG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCCGGCCCCAGAGGTCAAAGT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGACCCAGT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGATGACCATAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCATATATCCAAAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGCCCCCAGGGCCCGACCC10.5405405405405406No Hit
CTTANCTGAGGAGCCTGGCGGACCAGATCGGAAGAGCACACGTCTGAACT10.5405405405405406Illumina Multiplexing PCR Primer 2.01 (100% over 26bp)
CTTACCTGAGGAGACGGTGACCTGGGTTCCCTGGCCCCAGTAGTCAAGAT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAATAGGGACAAC10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGCTATAATCA10.5405405405405406No Hit
CTTACCTGGGGGCTGACGGATCCAAGATCGGAAGAGCACACGTCTGAACT10.5405405405405406Illumina Multiplexing PCR Primer 2.01 (100% over 26bp)
CTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATACC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGATTCCCTGGCCCCAGTAGTCAAATT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTGGGCCCCAGACGTCCATAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAATCGCGCC10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGGTGGACCT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGGCGTCCATCC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACA10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGGGTA10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGGG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACGAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATGGG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCGAACC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCCCAAT10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCGTGGTTCCTTGGCCCCAGACGGCCATAC10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGGT10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATG10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGGT10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCACGGCCCCAGAGATCGAAGC10.5405405405405406No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGATGTCCATAG10.5405405405405406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATA10.5405405405405406No Hit

[OK]Adapter Content

Adapter graph