FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132678

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132678
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences226
Sequences flagged as poor quality0
Sequence length151
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC2812.389380530973451No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC146.1946902654867255No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC125.3097345132743365No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC104.424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG93.982300884955752No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG52.2123893805309733No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT31.3274336283185841No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT31.3274336283185841No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT20.8849557522123894No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAA20.8849557522123894No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACAG20.8849557522123894No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC20.8849557522123894No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT20.8849557522123894No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG20.8849557522123894No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAG20.8849557522123894No Hit
CTTACCTGAGGAGACGGTGACCACGGTTCCCTGGCCCCAGGAGTCGAACC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAGGTCATTGG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGACTGGTTGAGTAATAACCACTACTA10.4424778761061947No Hit
CTTACCCGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAAGTCAAAGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCCGGGG10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCATGGTCCCCTGGCCCCAGACGTCAATAT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATCGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGAGATCAAAAC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATTC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCAAGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTAACCGTGGTCCCTTGGCCCCAGACGTCCATAC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCCCAGA10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATTC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCAAAGT10.4424778761061947No Hit
CTTACCTGAGGGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATACC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAGTTCCAACA10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCAGAG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCCTGGCCCCAGATATCATAAG10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATTT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGGCCC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGTAGCGGTGTT10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGACGAACC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCACAGGTGGAGAACACTGACAGCATCCTT10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGTTGA10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGCGACCATTGTCCCTTGGCCCCAGATATCAAAAG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACCCC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGCCCAGGGTTCCCTGGCCCCAGTAGTCAAAGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAAGTCAAGGC10.4424778761061947No Hit
CTTACCTGGGGGCTGGCGGATCCAAGATCGGAAGAGCACACGTCTGAACT10.4424778761061947Illumina Multiplexing PCR Primer 2.01 (100% over 26bp)
CTTANCTGAGGAGACGTTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAGG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTAGTAAT10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCCATCC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGAT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCGAAGC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGGTGGATAT10.4424778761061947No Hit
CTTACATGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGGAAGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATTA10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATTGTTCCTTGGCCCCAGACATCAAAAT10.4424778761061947No Hit
CTTACCTGAGGAGACGGATCCAAGATCGGAAGAGCACACGTCTGAACTCC10.4424778761061947Illumina Multiplexing PCR Primer 2.01 (100% over 28bp)
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTTGCCCCAGGGGTCGAACC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTACCAGGGTTCCCTGGCCCCAAAAATAATAACT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAACT10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATCC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAAGTCGTAAC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCAAGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATGGTTCCCTGGCCCCAGTAGTCAAAAG10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATGGTTCCCTGGCCCCAGGGGTCGAACC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCTTGGCCCCAGATAGCTAGGT10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGCTCAACGT10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACTA10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGTTGTCCCTTGGCCCCAGATTTTAAAAG10.4424778761061947No Hit
CTTACCTGAGGAGAGGTGACCGTTGTCCCTTGGCCCCAGACGTTTATATC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGGTAAGGT10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGCTCCCTGGCCCCAGTAGTCAAAGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACCG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCCAGGG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGGGGTTCCCTGGCCCCAGGTGTCAAAGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCCTGGCCCCAGATATCAAAAG10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCATGGCCCCAGATATCAAAAG10.4424778761061947No Hit
CTTACCTGAGGAGACTGCCTGATCCAAGATCGGAAGAGCACACGTCTGAA10.4424778761061947Illumina Multiplexing PCR Primer 2.01 (100% over 24bp)
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGTA10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTACAGGTAAC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCCTGGCCCCAGTCGTCCTCCC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACTA10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAAGGTTCCCTGGCCCCAGTAGCCAGGGG10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCACGGGTCCCTGGCCCCAGCAGTCAAACT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGTC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTTGCCCCAGTAGTCCAAGT10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCCCCAC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTCCCCTGGCCCCAGGATTCAAAGT10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTAGTACC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTTGCCCCAGATATCAAAGG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCCTGGCCCCAGTAGTCCATAC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGATCGCCTGGCCCCAGGAGTCAGACG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAAGTCAAAGG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGGGGTCCATAC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATTGTTCCCTGGCCCCAGATATCAACAG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCGGAC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCATAC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCAAAT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGGGGTTCCCTTGACCCAGAGGTCGATCC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTCGGCCCCAGACGTCCATAT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCAACCC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCAAAGC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACCTCCATCG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCCCTCTGCGGGGCTCTGGACAAGCAGCAG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAACC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGAGG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAGG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGACATCAATAG10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGCTGCAAGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGCTGGGAAC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGGGGTCCCTTTGCCCCAGACGTCCATGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAAACGGTAGTAA10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAT10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCGAACC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCAAAAG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCTGTAG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCCTGGCCCCAGATATGAAAAG10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCAAAA10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAAGT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGTGTTCCCTGACCCCAGTCTTGGGTTT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGAGCGGAAGAGCACACGACAGAACAAC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTCCCTTGGCCCCAGGGGTCGAACC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCCCACA10.4424778761061947No Hit
CTTANCTGAGGAGCCTGGCGGACCAGATCGGAAGAGCACACGTCTGAACT10.4424778761061947Illumina Multiplexing PCR Primer 2.01 (100% over 26bp)
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGGGC10.4424778761061947No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCATAAC10.4424778761061947No Hit
CTTACCAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATACCG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCTAGAG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGA10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGACATCAAAAC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACG10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACA10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCATGGTTCCCTGGCCCCAGGGGTCAAAAC10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACT10.4424778761061947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATG10.4424778761061947No Hit

[OK]Adapter Content

Adapter graph