FastQCFastQC Report
Fri 20 Jan 2023
EGAF00001149134

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001149134
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences250628347
Sequences flagged as poor quality0
Sequence length101
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN4783240.19084992010101715No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)