FastQCFastQC Report
Fri 20 Jan 2023
EGAF00001165052

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001165052
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences516451048
Sequences flagged as poor quality0
Sequence length50
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG29763230.5763030226245179No Hit
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT14937830.28923999782453724No Hit
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT7487770.14498508675695437No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)