FastQCFastQC Report
Fri 30 Dec 2022
EGAF00001165612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001165612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences173271275
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTT2754310.15895941205488331No Hit
CTAGACATGACAAGACCAGTGACTGGGTCAAACCCCAGTCTGAAGTTGCG2009290.11596209469803924No Hit
AGCTTAAGGTGTCGCCGCGAATGGCATGATCGTTCATGTCCTCCACCGGC1752460.10113967245869229No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)