FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001179070

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001179070
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1755615
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATTGAGGAATCTCGTA857944.886834528071359TruSeq Adapter, Index 25 (97% over 38bp)
TGTGGCAGGGGGGGGACAGAACTTTTGAGACCGCACCAGCGACACAAGAT25120.14308376267006148No Hit
TGTGGCAGGGGGAGGACAGAACTTTTGAGACCGCACCAGCGACACAAGAT24990.14234328141420527No Hit

[FAIL]Adapter Content

Adapter graph