FastQCFastQC Report
Tue 27 Sep 2022
EGAF00001209954

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001209954
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences19261760
Sequences flagged as poor quality0
Sequence length90
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCAAAACTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT443040.23001013406874554No Hit
GGGCGATTGATGAAAAGGCGGTTGAGGCGTCTGGTGAGTAGTGCATGGCT230410.11962042928579736No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)