FastQCFastQC Report
Sat 11 May 2024
EGAF00001209980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001209980
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences18877166
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length90
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCAAAACTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT327880.1736913263357434No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)