FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001210033

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001210033
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences19092906
Sequences flagged as poor quality0
Sequence length90
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT304320.159389042191901No Hit
GGGCGATTGATGAAAAGGCGGTTGAGGCGTCTGGTGAGTAGTGCATGGCT239260.12531355886840903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)