FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001211532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001211532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14373160
Sequences flagged as poor quality0
Sequence length35-151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1487691.0350472686590841No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCTCGCGCATCTCGTAT856890.5961737015381446TruSeq Adapter, Index 8 (97% over 36bp)
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG594840.4138547125336391No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)