FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001221195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001221195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5187772
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT126170.24320652488197245No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT121540.2342816916394938No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT85180.16419380034434822No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)