FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001221277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001221277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4686866
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT130470.2783736509642051No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT123140.26273420234331424No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT82050.1750636779459878No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)