FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001221295

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001221295
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5652386
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT238820.42251183836348044No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT171080.3026686429412287No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT128870.22799221426137564No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)