FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001221365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001221365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6787882
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT166070.24465658065358237No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT135320.19935526280509883No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT91190.13434234714156787No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)