FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001221433

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001221433
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7311617
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT234340.3205036587665902No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT194350.26580987488814034No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT118190.16164686963225783No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)