FastQCFastQC Report
Thu 9 May 2024
EGAF00001225880

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001225880
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21491560
Total Bases2.1 Gbp
Sequences flagged as poor quality0
Sequence length100
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph