FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001270774

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001270774
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1382774
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30310.21919706329450803No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT24360.17616761668935052No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA16840.12178418165224396No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)