FastQCFastQC Report
Sun 5 May 2024
EGAF00001271035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001271035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24673357
Total Bases2.2 Gbp
Sequences flagged as poor quality0
Sequence length90
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3848721.5598688090963868No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1081680.4384000118022042No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)