FastQCFastQC Report
Tue 27 Sep 2022
EGAF00001271043

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001271043
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24081272
Sequences flagged as poor quality0
Sequence length90
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2384540.9902051685641854No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT532810.22125492374323086No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)