FastQCFastQC Report
Sat 1 Apr 2023
EGAF00001271061

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001271061
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24028421
Sequences flagged as poor quality0
Sequence length90
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1000320.4163070057745367No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT291890.12147697928215923No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)